Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC00595 (long intergenic non-protein coding RNA 595)


Alias (NCBI)C10orf101
HGNC (Hugo) LINC00595
HGNC Previous nameC10orf101
HGNC Previous namechromosome 10 open reading frame 101
LocusID (NCBI) 414243
Atlas_Id 65519
Location 10q22.3  [Link to chromosome band 10q22]
Location_base_pair Starts at 78267342 and ends at 78280213 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC00595   31430
Entrez_Gene (NCBI)LINC00595    long intergenic non-protein coding RNA 595
GeneCards (Weizmann)LINC00595
Ensembl hg19 (Hinxton)ENSG00000230417 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000230417 [Gene_View]  ENSG00000230417 [Sequence]  chr10:78267342-78280213 [Contig_View]  LINC00595 [Vega]
ICGC DataPortalENSG00000230417
TCGA cBioPortalLINC00595
AceView (NCBI)LINC00595
Genatlas (Paris)LINC00595
SOURCE (Princeton)LINC00595
Genetics Home Reference (NIH)LINC00595
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00595  -     chr10:78267342-78280213 +  10q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00595  -     10q22.3   [Description]    (hg19-Feb_2009)
GoldenPathLINC00595 - 10q22.3 [CytoView hg19]  LINC00595 - 10q22.3 [CytoView hg38]
Genome Data Viewer NCBILINC00595 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AA256374 AK126491 BX280027
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00595
Gene ExpressionLINC00595 [ NCBI-GEO ]   LINC00595 [ EBI - ARRAY_EXPRESS ]   LINC00595 [ SEEK ]   LINC00595 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00595 [ Firebrowse - Broad ]
GenevisibleExpression of LINC00595 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)414243
GTEX Portal (Tissue expression)LINC00595
Human Protein AtlasENSG00000230417-LINC00595 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00595
Human Protein Atlas [tissue]ENSG00000230417-LINC00595 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:56:24 CEST 2021

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