Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC00601 (long intergenic non-protein coding RNA 601)


Alias (NCBI)-
HGNC (Hugo) LINC00601
LocusID (NCBI) 101101772
Atlas_Id 65523
Location 10q26.2  [Link to chromosome band 10q26]
Location_base_pair Starts at 126413869 and ends at 126421879 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC00601   43916
Entrez_Gene (NCBI)LINC00601    long intergenic non-protein coding RNA 601
GeneCards (Weizmann)LINC00601
Ensembl hg19 (Hinxton)ENSG00000235180 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235180 [Gene_View]  ENSG00000235180 [Sequence]  chr10:126413869-126421879 [Contig_View]  LINC00601 [Vega]
ICGC DataPortalENSG00000235180
TCGA cBioPortalLINC00601
AceView (NCBI)LINC00601
Genatlas (Paris)LINC00601
SOURCE (Princeton)LINC00601
Genetics Home Reference (NIH)LINC00601
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00601  -     chr10:126413869-126421879 -  10q26.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00601  -     10q26.2   [Description]    (hg19-Feb_2009)
GoldenPathLINC00601 - 10q26.2 [CytoView hg19]  LINC00601 - 10q26.2 [CytoView hg38]
Genome Data Viewer NCBILINC00601 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BF215388
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00601
Gene ExpressionLINC00601 [ NCBI-GEO ]   LINC00601 [ EBI - ARRAY_EXPRESS ]   LINC00601 [ SEEK ]   LINC00601 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00601 [ Firebrowse - Broad ]
GenevisibleExpression of LINC00601 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101101772
GTEX Portal (Tissue expression)LINC00601
Human Protein AtlasENSG00000235180-LINC00601 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00601
Human Protein Atlas [tissue]ENSG00000235180-LINC00601 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:56:25 CEST 2021

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