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LINC00601 (long intergenic non-protein coding RNA 601)

Identity

Alias (NCBI)-
HGNC (Hugo) LINC00601
LocusID (NCBI) 101101772
Atlas_Id 65523
Location 10q26.2  [Link to chromosome band 10q26]
Location_base_pair Starts at 126413869 and ends at 126421879 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC00601   43916
Cards
Entrez_Gene (NCBI)LINC00601    long intergenic non-protein coding RNA 601
Aliases
GeneCards (Weizmann)LINC00601
Ensembl hg19 (Hinxton)ENSG00000235180 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235180 [Gene_View]  ENSG00000235180 [Sequence]  chr10:126413869-126421879 [Contig_View]  LINC00601 [Vega]
ICGC DataPortalENSG00000235180
TCGA cBioPortalLINC00601
AceView (NCBI)LINC00601
Genatlas (Paris)LINC00601
SOURCE (Princeton)LINC00601
Genetics Home Reference (NIH)LINC00601
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00601  -     chr10:126413869-126421879 -  10q26.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00601  -     10q26.2   [Description]    (hg19-Feb_2009)
GoldenPathLINC00601 - 10q26.2 [CytoView hg19]  LINC00601 - 10q26.2 [CytoView hg38]
ImmunoBaseENSG00000235180
Genome Data Viewer NCBILINC00601 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BF215388
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00601
Gene ExpressionLINC00601 [ NCBI-GEO ]   LINC00601 [ EBI - ARRAY_EXPRESS ]   LINC00601 [ SEEK ]   LINC00601 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00601 [ Firebrowse - Broad ]
GenevisibleExpression of LINC00601 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101101772
GTEX Portal (Tissue expression)LINC00601
Human Protein AtlasENSG00000235180-LINC00601 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00601
Human Protein Atlas [tissue]ENSG00000235180-LINC00601 [tissue]
Protein Interaction databases
BioGRIDLINC00601
STRING (EMBL)LINC00601
ZODIACLINC00601
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXLINC00601
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:56:25 CEST 2021

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