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LINC00603 (long intergenic non-protein coding RNA 603)

Identity

Other alias-
HGNC (Hugo) LINC00603
LocusID (NCBI) 102467077
Atlas_Id 65525
Location 5p13.1  [Link to chromosome band 5p13]
Location_base_pair Starts at 40052291 and ends at 40053324 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00603   43918
Cards
Entrez_Gene (NCBI)LINC00603  102467077  long intergenic non-protein coding RNA 603
Aliases
GeneCards (Weizmann)LINC00603
Ensembl hg19 (Hinxton)ENSG00000250048 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000250048 [Gene_View]  chr5:40052291-40053324 [Contig_View]  LINC00603 [Vega]
ICGC DataPortalENSG00000250048
TCGA cBioPortalLINC00603
AceView (NCBI)LINC00603
Genatlas (Paris)LINC00603
WikiGenes102467077
SOURCE (Princeton)LINC00603
Genetics Home Reference (NIH)LINC00603
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00603  -     chr5:40052291-40053324 +  5p13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00603  -     5p13.1   [Description]    (hg19-Feb_2009)
EnsemblLINC00603 - 5p13.1 [CytoView hg19]  LINC00603 - 5p13.1 [CytoView hg38]
Mapping of homologs : NCBILINC00603 [Mapview hg19]  LINC00603 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX100325
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00603
Cluster EST : UnigeneHs.148993 [ NCBI ]
CGAP (NCI)Hs.148993
Alternative Splicing GalleryENSG00000250048
Gene ExpressionLINC00603 [ NCBI-GEO ]   LINC00603 [ EBI - ARRAY_EXPRESS ]   LINC00603 [ SEEK ]   LINC00603 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00603 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102467077
GTEX Portal (Tissue expression)LINC00603
Human Protein AtlasENSG00000250048-LINC00603 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00603
DMDM Disease mutations102467077
Blocks (Seattle)LINC00603
Human Protein Atlas [tissue]ENSG00000250048-LINC00603 [tissue]
Protein Interaction databases
FunCoupENSG00000250048
BioGRIDLINC00603
STRING (EMBL)LINC00603
ZODIACLINC00603
Ontologies - Pathways
Huge Navigator LINC00603 [HugePedia]
snp3D : Map Gene to Disease102467077
BioCentury BCIQLINC00603
ClinGenLINC00603
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102467077
Clinical trialLINC00603
Miscellaneous
canSAR (ICR)LINC00603 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00603
EVEXLINC00603
GoPubMedLINC00603
iHOPLINC00603
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:54:36 CET 2017

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