Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LINC00605 (long intergenic non-protein coding RNA 605)

Identity

Other alias-
HGNC (Hugo) LINC00605
LocusID (NCBI) 100131366
Atlas_Id 65526
Location 14q32.32  [Link to chromosome band 14q32]
Location_base_pair Starts at 103187221 and ends at 103189028 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00605   43928
Cards
Entrez_Gene (NCBI)LINC00605  100131366  long intergenic non-protein coding RNA 605
Aliases
GeneCards (Weizmann)LINC00605
Ensembl hg19 (Hinxton)ENSG00000251533 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000251533 [Gene_View]  chr14:103187221-103189028 [Contig_View]  LINC00605 [Vega]
ICGC DataPortalENSG00000251533
TCGA cBioPortalLINC00605
AceView (NCBI)LINC00605
Genatlas (Paris)LINC00605
WikiGenes100131366
SOURCE (Princeton)LINC00605
Genetics Home Reference (NIH)LINC00605
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00605  -     chr14:103187221-103189028 -  14q32.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00605  -     14q32.32   [Description]    (hg19-Feb_2009)
EnsemblLINC00605 - 14q32.32 [CytoView hg19]  LINC00605 - 14q32.32 [CytoView hg38]
Mapping of homologs : NCBILINC00605 [Mapview hg19]  LINC00605 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC035396 BX161461
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00605
Cluster EST : UnigeneHs.147881 [ NCBI ]
CGAP (NCI)Hs.147881
Alternative Splicing GalleryENSG00000251533
Gene ExpressionLINC00605 [ NCBI-GEO ]   LINC00605 [ EBI - ARRAY_EXPRESS ]   LINC00605 [ SEEK ]   LINC00605 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00605 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100131366
GTEX Portal (Tissue expression)LINC00605
Human Protein AtlasENSG00000251533-LINC00605 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00605
DMDM Disease mutations100131366
Blocks (Seattle)LINC00605
Human Protein Atlas [tissue]ENSG00000251533-LINC00605 [tissue]
IPIIPI00384145   
Protein Interaction databases
FunCoupENSG00000251533
BioGRIDLINC00605
STRING (EMBL)LINC00605
ZODIACLINC00605
Ontologies - Pathways
Huge Navigator LINC00605 [HugePedia]
snp3D : Map Gene to Disease100131366
BioCentury BCIQLINC00605
ClinGenLINC00605
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100131366
Clinical trialLINC00605
Miscellaneous
canSAR (ICR)LINC00605 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00605
EVEXLINC00605
GoPubMedLINC00605
iHOPLINC00605
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:54:36 CET 2017

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