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LINC00613 (long intergenic non-protein coding RNA 613)

Identity

Other alias-
HGNC (Hugo) LINC00613
LocusID (NCBI) 100507528
Atlas_Id 65533
Location 4q28.3  [Link to chromosome band 4q28]
Location_base_pair Starts at 135866984 and ends at 135888093 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00613   44060
Cards
Entrez_Gene (NCBI)LINC00613  100507528  long intergenic non-protein coding RNA 613
Aliases
GeneCards (Weizmann)LINC00613
Ensembl hg19 (Hinxton)ENSG00000248330 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248330 [Gene_View]  chr4:135866984-135888093 [Contig_View]  LINC00613 [Vega]
ICGC DataPortalENSG00000248330
TCGA cBioPortalLINC00613
AceView (NCBI)LINC00613
Genatlas (Paris)LINC00613
WikiGenes100507528
SOURCE (Princeton)LINC00613
Genetics Home Reference (NIH)LINC00613
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00613  -     chr4:135866984-135888093 -  4q28.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00613  -     4q28.3   [Description]    (hg19-Feb_2009)
EnsemblLINC00613 - 4q28.3 [CytoView hg19]  LINC00613 - 4q28.3 [CytoView hg38]
Mapping of homologs : NCBILINC00613 [Mapview hg19]  LINC00613 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW237894 BG204498 BG220241
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00613
Cluster EST : UnigeneHs.730081 [ NCBI ]
CGAP (NCI)Hs.730081
Alternative Splicing GalleryENSG00000248330
Gene ExpressionLINC00613 [ NCBI-GEO ]   LINC00613 [ EBI - ARRAY_EXPRESS ]   LINC00613 [ SEEK ]   LINC00613 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00613 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507528
GTEX Portal (Tissue expression)LINC00613
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00613
DMDM Disease mutations100507528
Blocks (Seattle)LINC00613
Human Protein AtlasENSG00000248330
Protein Interaction databases
FunCoupENSG00000248330
BioGRIDLINC00613
STRING (EMBL)LINC00613
ZODIACLINC00613
Ontologies - Pathways
Huge Navigator LINC00613 [HugePedia]
snp3D : Map Gene to Disease100507528
BioCentury BCIQLINC00613
ClinGenLINC00613
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507528
Clinical trialLINC00613
Miscellaneous
canSAR (ICR)LINC00613 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00613
EVEXLINC00613
GoPubMedLINC00613
iHOPLINC00613
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:57:00 CEST 2017

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