Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LINC00619 (long intergenic non-protein coding RNA 619)

Identity

Alias_namesC10orf136
chromosome 10 open reading frame 136
Alias_symbol (synonym)bA168P8.1
Other alias
HGNC (Hugo) LINC00619
LocusID (NCBI) 414260
Atlas_Id 65537
Location 10q11.21  [Link to chromosome band 10q11]
Location_base_pair Starts at 44340754 and ends at 44346070 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00619   31657
Cards
Entrez_Gene (NCBI)LINC00619  414260  long intergenic non-protein coding RNA 619
AliasesC10orf136; bA168P8.1
GeneCards (Weizmann)LINC00619
Ensembl hg19 (Hinxton)ENSG00000204187 [Gene_View]  chr10:44340754-44346070 [Contig_View]  LINC00619 [Vega]
Ensembl hg38 (Hinxton)ENSG00000204187 [Gene_View]  chr10:44340754-44346070 [Contig_View]  LINC00619 [Vega]
ICGC DataPortalENSG00000204187
TCGA cBioPortalLINC00619
AceView (NCBI)LINC00619
Genatlas (Paris)LINC00619
WikiGenes414260
SOURCE (Princeton)LINC00619
Genetics Home Reference (NIH)LINC00619
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00619  -     chr10:44340754-44346070 +  10q11.21   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00619  -     10q11.21   [Description]    (hg38-Dec_2013)
EnsemblLINC00619 - 10q11.21 [CytoView hg19]  LINC00619 - 10q11.21 [CytoView hg38]
Mapping of homologs : NCBILINC00619 [Mapview hg19]  LINC00619 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC017939 HG502845
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000010 NC_018921 NT_030059 NW_004929371
Consensus coding sequences : CCDS (NCBI)LINC00619
Cluster EST : UnigeneHs.351856 [ NCBI ]
CGAP (NCI)Hs.351856
Alternative Splicing GalleryENSG00000204187
Gene ExpressionLINC00619 [ NCBI-GEO ]   LINC00619 [ EBI - ARRAY_EXPRESS ]   LINC00619 [ SEEK ]   LINC00619 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00619 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)414260
GTEX Portal (Tissue expression)LINC00619
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00619
DMDM Disease mutations414260
Blocks (Seattle)LINC00619
Human Protein AtlasENSG00000204187
IPIIPI00641472   
Protein Interaction databases
FunCoupENSG00000204187
BioGRIDLINC00619
STRING (EMBL)LINC00619
ZODIACLINC00619
Ontologies - Pathways
Huge Navigator LINC00619 [HugePedia]
snp3D : Map Gene to Disease414260
BioCentury BCIQLINC00619
ClinGenLINC00619
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD414260
Chemical/Pharm GKB GenePA134898117
Clinical trialLINC00619
Miscellaneous
canSAR (ICR)LINC00619 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00619
EVEXLINC00619
GoPubMedLINC00619
iHOPLINC00619
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:12:07 CET 2017

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