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LINC00620 (long intergenic non-protein coding RNA 620)

Identity

Other alias-
HGNC (Hugo) LINC00620
LocusID (NCBI) 285375
Atlas_Id 65538
Location 3p25.1  [Link to chromosome band 3p25]
Location_base_pair Starts at 13650721 and ends at 13746635 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00620   44223
Cards
Entrez_Gene (NCBI)LINC00620  285375  long intergenic non-protein coding RNA 620
Aliases
GeneCards (Weizmann)LINC00620
Ensembl hg19 (Hinxton)ENSG00000224514 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000224514 [Gene_View]  chr3:13650721-13746635 [Contig_View]  LINC00620 [Vega]
ICGC DataPortalENSG00000224514
TCGA cBioPortalLINC00620
AceView (NCBI)LINC00620
Genatlas (Paris)LINC00620
WikiGenes285375
SOURCE (Princeton)LINC00620
Genetics Home Reference (NIH)LINC00620
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00620  -     chr3:13650721-13746635 +  3p25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00620  -     3p25.1   [Description]    (hg19-Feb_2009)
EnsemblLINC00620 - 3p25.1 [CytoView hg19]  LINC00620 - 3p25.1 [CytoView hg38]
Mapping of homologs : NCBILINC00620 [Mapview hg19]  LINC00620 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC039529
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00620
Cluster EST : UnigeneHs.319969 [ NCBI ]
CGAP (NCI)Hs.319969
Alternative Splicing GalleryENSG00000224514
Gene ExpressionLINC00620 [ NCBI-GEO ]   LINC00620 [ EBI - ARRAY_EXPRESS ]   LINC00620 [ SEEK ]   LINC00620 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00620 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)285375
GTEX Portal (Tissue expression)LINC00620
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00620
DMDM Disease mutations285375
Blocks (Seattle)LINC00620
Human Protein AtlasENSG00000224514
IPIIPI00976243   
Protein Interaction databases
FunCoupENSG00000224514
BioGRIDLINC00620
STRING (EMBL)LINC00620
ZODIACLINC00620
Ontologies - Pathways
Huge Navigator LINC00620 [HugePedia]
snp3D : Map Gene to Disease285375
BioCentury BCIQLINC00620
ClinGenLINC00620
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD285375
Clinical trialLINC00620
Miscellaneous
canSAR (ICR)LINC00620 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00620
EVEXLINC00620
GoPubMedLINC00620
iHOPLINC00620
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:57:01 CEST 2017

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