Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC00621 (long intergenic non-protein coding RNA 621)

Identity

Other alias-
HGNC (Hugo) LINC00621
LocusID (NCBI) 100996930
Atlas_Id 65539
Location 13q12.12  [Link to chromosome band 13q12]
Location_base_pair Starts at 22876392 and ends at 22916369 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00621   44227
Cards
Entrez_Gene (NCBI)LINC00621  100996930  long intergenic non-protein coding RNA 621
Aliases
GeneCards (Weizmann)LINC00621
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:22876392-22916369 [Contig_View]  LINC00621 [Vega]
TCGA cBioPortalLINC00621
AceView (NCBI)LINC00621
Genatlas (Paris)LINC00621
WikiGenes100996930
SOURCE (Princeton)LINC00621
Genetics Home Reference (NIH)LINC00621
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00621  -     chr13:22876392-22916369 -  13q12.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00621  -     13q12.12   [Description]    (hg19-Feb_2009)
EnsemblLINC00621 - 13q12.12 [CytoView hg19]  LINC00621 - 13q12.12 [CytoView hg38]
Mapping of homologs : NCBILINC00621 [Mapview hg19]  LINC00621 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK091626 DA752665
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00621
Cluster EST : UnigeneHs.380803 [ NCBI ]
CGAP (NCI)Hs.380803
Gene ExpressionLINC00621 [ NCBI-GEO ]   LINC00621 [ EBI - ARRAY_EXPRESS ]   LINC00621 [ SEEK ]   LINC00621 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00621 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100996930
GTEX Portal (Tissue expression)LINC00621
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00621
DMDM Disease mutations100996930
Blocks (Seattle)LINC00621
Protein Interaction databases
BioGRIDLINC00621
STRING (EMBL)LINC00621
ZODIACLINC00621
Ontologies - Pathways
Huge Navigator LINC00621 [HugePedia]
snp3D : Map Gene to Disease100996930
BioCentury BCIQLINC00621
ClinGenLINC00621
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100996930
Clinical trialLINC00621
Miscellaneous
canSAR (ICR)LINC00621 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00621
EVEXLINC00621
GoPubMedLINC00621
iHOPLINC00621
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:57:02 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.