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LINC00622 (long intergenic non-protein coding RNA 622)

Identity

Other alias-
HGNC (Hugo) LINC00622
LocusID (NCBI) 644242
Atlas_Id 65540
Location 1p12  [Link to chromosome band 1p12]
Location_base_pair Starts at 119597702 and ends at 119599291 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00622   44251
Cards
Entrez_Gene (NCBI)LINC00622  644242  long intergenic non-protein coding RNA 622
Aliases
GeneCards (Weizmann)LINC00622
Ensembl hg19 (Hinxton)ENSG00000260941 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000260941 [Gene_View]  chr1:119597702-119599291 [Contig_View]  LINC00622 [Vega]
ICGC DataPortalENSG00000260941
TCGA cBioPortalLINC00622
AceView (NCBI)LINC00622
Genatlas (Paris)LINC00622
WikiGenes644242
SOURCE (Princeton)LINC00622
Genetics Home Reference (NIH)LINC00622
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00622  -     chr1:119597702-119599291 -  1p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00622  -     1p12   [Description]    (hg19-Feb_2009)
EnsemblLINC00622 - 1p12 [CytoView hg19]  LINC00622 - 1p12 [CytoView hg38]
Mapping of homologs : NCBILINC00622 [Mapview hg19]  LINC00622 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI791995 AK123168 BC015390 BQ433915
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00622
Cluster EST : UnigeneHs.515383 [ NCBI ]
CGAP (NCI)Hs.515383
Alternative Splicing GalleryENSG00000260941
Gene ExpressionLINC00622 [ NCBI-GEO ]   LINC00622 [ EBI - ARRAY_EXPRESS ]   LINC00622 [ SEEK ]   LINC00622 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00622 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)644242
GTEX Portal (Tissue expression)LINC00622
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00622
DMDM Disease mutations644242
Blocks (Seattle)LINC00622
Human Protein AtlasENSG00000260941
Protein Interaction databases
FunCoupENSG00000260941
BioGRIDLINC00622
STRING (EMBL)LINC00622
ZODIACLINC00622
Ontologies - Pathways
Huge Navigator LINC00622 [HugePedia]
snp3D : Map Gene to Disease644242
BioCentury BCIQLINC00622
ClinGenLINC00622
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD644242
Clinical trialLINC00622
Miscellaneous
canSAR (ICR)LINC00622 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00622
EVEXLINC00622
GoPubMedLINC00622
iHOPLINC00622
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Aug 1 16:19:48 CEST 2017

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