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LINC00623 (long intergenic non-protein coding RNA 623)

Identity

Other aliasCH17-118O6.2
HGNC (Hugo) LINC00623
LocusID (NCBI) 728855
Atlas_Id 65541
Location 1q21.2  [Link to chromosome band 1q21]
Location_base_pair Starts at 149576467 and ends at 149619134 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00623   44252
Cards
Entrez_Gene (NCBI)LINC00623  728855  long intergenic non-protein coding RNA 623
AliasesCH17-118O6.2
GeneCards (Weizmann)LINC00623
Ensembl hg19 (Hinxton) [Gene_View]  chr1:149576467-149619134 [Contig_View]  LINC00623 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:149576467-149619134 [Contig_View]  LINC00623 [Vega]
TCGA cBioPortalLINC00623
AceView (NCBI)LINC00623
Genatlas (Paris)LINC00623
WikiGenes728855
SOURCE (Princeton)LINC00623
Genetics Home Reference (NIH)LINC00623
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00623  -     chr1:149576467-149619134 +  1q21.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00623  -     1q21.2   [Description]    (hg38-Dec_2013)
EnsemblLINC00623 - 1q21.2 [CytoView hg19]  LINC00623 - 1q21.2 [CytoView hg38]
Mapping of homologs : NCBILINC00623 [Mapview hg19]  LINC00623 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK311378 BC009950 BC063535 BC089397 BC094809
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_032977 NW_004929290
Consensus coding sequences : CCDS (NCBI)LINC00623
Cluster EST : UnigeneHs.662922 [ NCBI ]
CGAP (NCI)Hs.662922
Gene ExpressionLINC00623 [ NCBI-GEO ]   LINC00623 [ EBI - ARRAY_EXPRESS ]   LINC00623 [ SEEK ]   LINC00623 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00623 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)728855
GTEX Portal (Tissue expression)LINC00623
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00623
DMDM Disease mutations728855
Blocks (Seattle)LINC00623
IPIIPI00929747   
Protein Interaction databases
BioGRIDLINC00623
STRING (EMBL)LINC00623
ZODIACLINC00623
Ontologies - Pathways
Huge Navigator LINC00623 [HugePedia]
snp3D : Map Gene to Disease728855
BioCentury BCIQLINC00623
ClinGenLINC00623
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD728855
Clinical trialLINC00623
Miscellaneous
canSAR (ICR)LINC00623 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00623
EVEXLINC00623
GoPubMedLINC00623
iHOPLINC00623
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:12:08 CET 2017

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