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LINC00629 (long intergenic non-protein coding RNA 629)

Identity

Other aliasLINC00629A
LINC00629B
LINC00629C
LINC00629D
HGNC (Hugo) LINC00629
LocusID (NCBI) 100506757
Atlas_Id 55944
Location Xq26.3  [Link to chromosome band Xq26]
Location_base_pair Starts at 134550024 and ends at 134560398 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00629   44262
Cards
Entrez_Gene (NCBI)LINC00629  100506757  long intergenic non-protein coding RNA 629
AliasesLINC00629A; LINC00629B; LINC00629C; LINC00629D
GeneCards (Weizmann)LINC00629
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chrX:134550024-134560398 [Contig_View]  LINC00629 [Vega]
TCGA cBioPortalLINC00629
AceView (NCBI)LINC00629
Genatlas (Paris)LINC00629
WikiGenes100506757
SOURCE (Princeton)LINC00629
Genetics Home Reference (NIH)LINC00629
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00629  -     chrX:134550024-134560398 +  Xq26.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00629  -     Xq26.3   [Description]    (hg19-Feb_2009)
EnsemblLINC00629 - Xq26.3 [CytoView hg19]  LINC00629 - Xq26.3 [CytoView hg38]
Mapping of homologs : NCBILINC00629 [Mapview hg19]  LINC00629 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK022994 KM886854 KM886855 KM886856 KM886857
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00629
Cluster EST : UnigeneHs.130961 [ NCBI ]
CGAP (NCI)Hs.130961
Gene ExpressionLINC00629 [ NCBI-GEO ]   LINC00629 [ EBI - ARRAY_EXPRESS ]   LINC00629 [ SEEK ]   LINC00629 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00629 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506757
GTEX Portal (Tissue expression)LINC00629
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00629
DMDM Disease mutations100506757
Blocks (Seattle)LINC00629
Protein Interaction databases
BioGRIDLINC00629
STRING (EMBL)LINC00629
ZODIACLINC00629
Ontologies - Pathways
Huge Navigator LINC00629 [HugePedia]
snp3D : Map Gene to Disease100506757
BioCentury BCIQLINC00629
ClinGenLINC00629
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506757
Clinical trialLINC00629
Miscellaneous
canSAR (ICR)LINC00629 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00629
EVEXLINC00629
GoPubMedLINC00629
iHOPLINC00629
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:19:57 CET 2017

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