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LINC00636 (long intergenic non-protein coding RNA 636)

Identity

Other alias-
HGNC (Hugo) LINC00636
LocusID (NCBI) 285205
Atlas_Id 65551
Location 3q13.12  [Link to chromosome band 3q13]
Location_base_pair Starts at 107602052 and ends at 107647753 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00636   27702
Cards
Entrez_Gene (NCBI)LINC00636  285205  long intergenic non-protein coding RNA 636
Aliases
GeneCards (Weizmann)LINC00636
Ensembl hg19 (Hinxton)ENSG00000240423 [Gene_View]  chr3:107602052-107647753 [Contig_View]  LINC00636 [Vega]
Ensembl hg38 (Hinxton)ENSG00000240423 [Gene_View]  chr3:107602052-107647753 [Contig_View]  LINC00636 [Vega]
ICGC DataPortalENSG00000240423
TCGA cBioPortalLINC00636
AceView (NCBI)LINC00636
Genatlas (Paris)LINC00636
WikiGenes285205
SOURCE (Princeton)LINC00636
Genetics Home Reference (NIH)LINC00636
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00636  -     chr3:107602052-107647753 +  3q13.12   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00636  -     3q13.12   [Description]    (hg38-Dec_2013)
EnsemblLINC00636 - 3q13.12 [CytoView hg19]  LINC00636 - 3q13.12 [CytoView hg38]
Mapping of homologs : NCBILINC00636 [Mapview hg19]  LINC00636 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK127985 BC039517 BC101228 BC101229 BC101230
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_005612 NW_004929311
Consensus coding sequences : CCDS (NCBI)LINC00636
Cluster EST : UnigeneHs.737218 [ NCBI ]
CGAP (NCI)Hs.737218
Alternative Splicing GalleryENSG00000240423
Gene ExpressionLINC00636 [ NCBI-GEO ]   LINC00636 [ EBI - ARRAY_EXPRESS ]   LINC00636 [ SEEK ]   LINC00636 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00636 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)285205
GTEX Portal (Tissue expression)LINC00636
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00636
DMDM Disease mutations285205
Blocks (Seattle)LINC00636
Human Protein AtlasENSG00000240423
IPIIPI00795046   
Protein Interaction databases
FunCoupENSG00000240423
BioGRIDLINC00636
STRING (EMBL)LINC00636
ZODIACLINC00636
Ontologies - Pathways
Huge Navigator LINC00636 [HugePedia]
snp3D : Map Gene to Disease285205
BioCentury BCIQLINC00636
ClinGenLINC00636
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD285205
Clinical trialLINC00636
Miscellaneous
canSAR (ICR)LINC00636 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00636
EVEXLINC00636
GoPubMedLINC00636
iHOPLINC00636
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:12:10 CET 2017

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