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LINC00638 (long intergenic non-protein coding RNA 638)

Identity

Alias_symbol (synonym)MGC23270
Other alias-
HGNC (Hugo) LINC00638
LocusID (NCBI) 196872
Atlas_Id 65553
Location 14q32.33  [Link to chromosome band 14q32]
Location_base_pair Starts at 105287538 and ends at 105290055 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00638   28325
Cards
Entrez_Gene (NCBI)LINC00638  196872  long intergenic non-protein coding RNA 638
Aliases
GeneCards (Weizmann)LINC00638
Ensembl hg19 (Hinxton)ENSG00000258701 [Gene_View]  chr14:105287538-105290055 [Contig_View]  LINC00638 [Vega]
Ensembl hg38 (Hinxton)ENSG00000258701 [Gene_View]  chr14:105287538-105290055 [Contig_View]  LINC00638 [Vega]
ICGC DataPortalENSG00000258701
TCGA cBioPortalLINC00638
AceView (NCBI)LINC00638
Genatlas (Paris)LINC00638
WikiGenes196872
SOURCE (Princeton)LINC00638
Genetics Home Reference (NIH)LINC00638
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00638  -     chr14:105287538-105290055 +  14q32.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00638  -     14q32.33   [Description]    (hg38-Dec_2013)
EnsemblLINC00638 - 14q32.33 [CytoView hg19]  LINC00638 - 14q32.33 [CytoView hg38]
Mapping of homologs : NCBILINC00638 [Mapview hg19]  LINC00638 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK095404 AK292179 BC015579 BC041036 HG506697
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000014 NC_018925 NT_026437 NW_004929393
Consensus coding sequences : CCDS (NCBI)LINC00638
Cluster EST : UnigeneHs.352220 [ NCBI ]
CGAP (NCI)Hs.352220
Alternative Splicing GalleryENSG00000258701
Gene ExpressionLINC00638 [ NCBI-GEO ]   LINC00638 [ EBI - ARRAY_EXPRESS ]   LINC00638 [ SEEK ]   LINC00638 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00638 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)196872
GTEX Portal (Tissue expression)LINC00638
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00638
DMDM Disease mutations196872
Blocks (Seattle)LINC00638
Human Protein AtlasENSG00000258701
IPIIPI00217135   
Protein Interaction databases
FunCoupENSG00000258701
BioGRIDLINC00638
STRING (EMBL)LINC00638
ZODIACLINC00638
Ontologies - Pathways
Huge Navigator LINC00638 [HugePedia]
snp3D : Map Gene to Disease196872
BioCentury BCIQLINC00638
ClinGenLINC00638
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD196872
Clinical trialLINC00638
Miscellaneous
canSAR (ICR)LINC00638 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00638
EVEXLINC00638
GoPubMedLINC00638
iHOPLINC00638
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:12:10 CET 2017

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