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LINC00639 (long intergenic non-protein coding RNA 639)

Identity

Other alias-
HGNC (Hugo) LINC00639
LocusID (NCBI) 283547
Atlas_Id 65554
Location 14q21.1  [Link to chromosome band 14q21]
Location_base_pair Starts at 38749339 and ends at 38916882 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00639   27502
Cards
Entrez_Gene (NCBI)LINC00639  283547  long intergenic non-protein coding RNA 639
Aliases
GeneCards (Weizmann)LINC00639
Ensembl hg19 (Hinxton)ENSG00000259070 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000259070 [Gene_View]  chr14:38749339-38916882 [Contig_View]  LINC00639 [Vega]
ICGC DataPortalENSG00000259070
TCGA cBioPortalLINC00639
AceView (NCBI)LINC00639
Genatlas (Paris)LINC00639
WikiGenes283547
SOURCE (Princeton)LINC00639
Genetics Home Reference (NIH)LINC00639
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00639  -     chr14:38749339-38916882 -  14q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00639  -     14q21.1   [Description]    (hg19-Feb_2009)
EnsemblLINC00639 - 14q21.1 [CytoView hg19]  LINC00639 - 14q21.1 [CytoView hg38]
Mapping of homologs : NCBILINC00639 [Mapview hg19]  LINC00639 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK125018 AK127318 BC035119 BC113646 BC113672
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00639
Cluster EST : UnigeneHs.675941 [ NCBI ]
CGAP (NCI)Hs.675941
Alternative Splicing GalleryENSG00000259070
Gene ExpressionLINC00639 [ NCBI-GEO ]   LINC00639 [ EBI - ARRAY_EXPRESS ]   LINC00639 [ SEEK ]   LINC00639 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00639 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)283547
GTEX Portal (Tissue expression)LINC00639
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00639
DMDM Disease mutations283547
Blocks (Seattle)LINC00639
Human Protein AtlasENSG00000259070
IPIIPI00742823   
Protein Interaction databases
FunCoupENSG00000259070
BioGRIDLINC00639
STRING (EMBL)LINC00639
ZODIACLINC00639
Ontologies - Pathways
Huge Navigator LINC00639 [HugePedia]
snp3D : Map Gene to Disease283547
BioCentury BCIQLINC00639
ClinGenLINC00639
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283547
Clinical trialLINC00639
Miscellaneous
canSAR (ICR)LINC00639 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00639
EVEXLINC00639
GoPubMedLINC00639
iHOPLINC00639
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:57:05 CEST 2017

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