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LINC00645 (long intergenic non-protein coding RNA 645)

Identity

Other alias-
HGNC (Hugo) LINC00645
LocusID (NCBI) 100505967
Atlas_Id 65560
Location 14q12  [Link to chromosome band 14q12]
Location_base_pair Starts at 27612588 and ends at 27639636 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00645   44299
Cards
Entrez_Gene (NCBI)LINC00645  100505967  long intergenic non-protein coding RNA 645
Aliases
GeneCards (Weizmann)LINC00645
Ensembl hg19 (Hinxton)ENSG00000258548 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000258548 [Gene_View]  chr14:27612588-27639636 [Contig_View]  LINC00645 [Vega]
ICGC DataPortalENSG00000258548
TCGA cBioPortalLINC00645
AceView (NCBI)LINC00645
Genatlas (Paris)LINC00645
WikiGenes100505967
SOURCE (Princeton)LINC00645
Genetics Home Reference (NIH)LINC00645
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00645  -     chr14:27612588-27639636 +  14q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00645  -     14q12   [Description]    (hg19-Feb_2009)
EnsemblLINC00645 - 14q12 [CytoView hg19]  LINC00645 - 14q12 [CytoView hg38]
Mapping of homologs : NCBILINC00645 [Mapview hg19]  LINC00645 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC042069 BX538073 BX538140
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00645
Cluster EST : UnigeneHs.668484 [ NCBI ]
CGAP (NCI)Hs.668484
Alternative Splicing GalleryENSG00000258548
Gene ExpressionLINC00645 [ NCBI-GEO ]   LINC00645 [ EBI - ARRAY_EXPRESS ]   LINC00645 [ SEEK ]   LINC00645 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00645 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100505967
GTEX Portal (Tissue expression)LINC00645
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00645
DMDM Disease mutations100505967
Blocks (Seattle)LINC00645
Human Protein AtlasENSG00000258548
Protein Interaction databases
FunCoupENSG00000258548
BioGRIDLINC00645
STRING (EMBL)LINC00645
ZODIACLINC00645
Ontologies - Pathways
Huge Navigator LINC00645 [HugePedia]
snp3D : Map Gene to Disease100505967
BioCentury BCIQLINC00645
ClinGenLINC00645
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100505967
Clinical trialLINC00645
Miscellaneous
canSAR (ICR)LINC00645 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00645
EVEXLINC00645
GoPubMedLINC00645
iHOPLINC00645
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:57:06 CEST 2017

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