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LINC00652 (long intergenic non-protein coding RNA 652)

Identity

Alias_symbol (synonym)HSPC072
Other alias
HGNC (Hugo) LINC00652
LocusID (NCBI) 29075
Atlas_Id 65563
Location 20p11.23  [Link to chromosome band 20p11]
Location_base_pair Starts at 18769308 and ends at 18774933 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00652   25003
Cards
Entrez_Gene (NCBI)LINC00652  29075  long intergenic non-protein coding RNA 652
AliasesHSPC072
GeneCards (Weizmann)LINC00652
Ensembl hg19 (Hinxton) [Gene_View]  chr20:18769308-18774933 [Contig_View]  LINC00652 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr20:18769308-18774933 [Contig_View]  LINC00652 [Vega]
TCGA cBioPortalLINC00652
AceView (NCBI)LINC00652
Genatlas (Paris)LINC00652
WikiGenes29075
SOURCE (Princeton)LINC00652
Genetics Home Reference (NIH)LINC00652
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00652  -     chr20:18769308-18774933 -  20p11.23   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00652  -     20p11.23   [Description]    (hg38-Dec_2013)
EnsemblLINC00652 - 20p11.23 [CytoView hg19]  LINC00652 - 20p11.23 [CytoView hg38]
Mapping of homologs : NCBILINC00652 [Mapview hg19]  LINC00652 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF161557 AK094606 BC029555 BC102038 BC102039
RefSeq transcript (Entrez)NM_014162
RefSeq genomic (Entrez)NC_000020 NC_018931 NT_011387 NW_004929416
Consensus coding sequences : CCDS (NCBI)LINC00652
Cluster EST : UnigeneHs.584899 [ NCBI ]
CGAP (NCI)Hs.584899
Gene ExpressionLINC00652 [ NCBI-GEO ]   LINC00652 [ EBI - ARRAY_EXPRESS ]   LINC00652 [ SEEK ]   LINC00652 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00652 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)29075
GTEX Portal (Tissue expression)LINC00652
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00652
DMDM Disease mutations29075
Blocks (Seattle)LINC00652
HPRD13693
IPIIPI00023061   
Protein Interaction databases
BioGRIDLINC00652
STRING (EMBL)LINC00652
ZODIACLINC00652
Ontologies - Pathways
Huge Navigator LINC00652 [HugePedia]
snp3D : Map Gene to Disease29075
BioCentury BCIQLINC00652
ClinGenLINC00652
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD29075
Clinical trialLINC00652
Miscellaneous
canSAR (ICR)LINC00652 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00652
EVEXLINC00652
GoPubMedLINC00652
iHOPLINC00652
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:12:12 CET 2017

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