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LINC00654 (long intergenic non-protein coding RNA 654)

Identity

Other alias-
HGNC (Hugo) LINC00654
LocusID (NCBI) 149837
Atlas_Id 65564
Location 20p12.3  [Link to chromosome band 20p12]
Location_base_pair Starts at 5496067 and ends at 5504596 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00654   27154
Cards
Entrez_Gene (NCBI)LINC00654  149837  long intergenic non-protein coding RNA 654
Aliases
GeneCards (Weizmann)LINC00654
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr20:5496067-5504596 [Contig_View]  LINC00654 [Vega]
TCGA cBioPortalLINC00654
AceView (NCBI)LINC00654
Genatlas (Paris)LINC00654
WikiGenes149837
SOURCE (Princeton)LINC00654
Genetics Home Reference (NIH)LINC00654
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00654  -     chr20:5496067-5504596 -  20p12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00654  -     20p12.3   [Description]    (hg19-Feb_2009)
EnsemblLINC00654 - 20p12.3 [CytoView hg19]  LINC00654 - 20p12.3 [CytoView hg38]
Mapping of homologs : NCBILINC00654 [Mapview hg19]  LINC00654 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK289970 AK291486 AK292266 AL137476 BC067900
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00654
Cluster EST : UnigeneHs.709473 [ NCBI ]
CGAP (NCI)Hs.709473
Gene ExpressionLINC00654 [ NCBI-GEO ]   LINC00654 [ EBI - ARRAY_EXPRESS ]   LINC00654 [ SEEK ]   LINC00654 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00654 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)149837
GTEX Portal (Tissue expression)LINC00654
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00654
DMDM Disease mutations149837
Blocks (Seattle)LINC00654
IPIIPI00719259   
Protein Interaction databases
BioGRIDLINC00654
STRING (EMBL)LINC00654
ZODIACLINC00654
Ontologies - Pathways
Huge Navigator LINC00654 [HugePedia]
snp3D : Map Gene to Disease149837
BioCentury BCIQLINC00654
ClinGenLINC00654
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD149837
Clinical trialLINC00654
Miscellaneous
canSAR (ICR)LINC00654 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00654
EVEXLINC00654
GoPubMedLINC00654
iHOPLINC00654
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:13:29 CEST 2017

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