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LINC00657 (long intergenic non-protein coding RNA 657)

Identity

Other alias-
HGNC (Hugo) LINC00657
LocusID (NCBI) 647979
Atlas_Id 65566
Location 20q11.23  [Link to chromosome band 20q11]
Location_base_pair Starts at 34633540 and ends at 34638882 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00657   44311
Cards
Entrez_Gene (NCBI)LINC00657  647979  long intergenic non-protein coding RNA 657
Aliases
GeneCards (Weizmann)LINC00657
Ensembl hg19 (Hinxton)ENSG00000260032 [Gene_View]  chr20:34633540-34638882 [Contig_View]  LINC00657 [Vega]
Ensembl hg38 (Hinxton)ENSG00000260032 [Gene_View]  chr20:34633540-34638882 [Contig_View]  LINC00657 [Vega]
ICGC DataPortalENSG00000260032
TCGA cBioPortalLINC00657
AceView (NCBI)LINC00657
Genatlas (Paris)LINC00657
WikiGenes647979
SOURCE (Princeton)LINC00657
Genetics Home Reference (NIH)LINC00657
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00657  -     chr20:34633540-34638882 -  20q11.23   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00657  -     20q11.23   [Description]    (hg38-Dec_2013)
EnsemblLINC00657 - 20q11.23 [CytoView hg19]  LINC00657 - 20q11.23 [CytoView hg38]
Mapping of homologs : NCBILINC00657 [Mapview hg19]  LINC00657 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI619767 AK090641 BC011592 HG511340
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000020 NC_018931 NT_011362 NW_004929418
Consensus coding sequences : CCDS (NCBI)LINC00657
Cluster EST : UnigeneHs.743232 [ NCBI ]
CGAP (NCI)Hs.743232
Alternative Splicing GalleryENSG00000260032
Gene ExpressionLINC00657 [ NCBI-GEO ]   LINC00657 [ EBI - ARRAY_EXPRESS ]   LINC00657 [ SEEK ]   LINC00657 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00657 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)647979
GTEX Portal (Tissue expression)LINC00657
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00657
DMDM Disease mutations647979
Blocks (Seattle)LINC00657
Human Protein AtlasENSG00000260032
IPIIPI00981422   
Protein Interaction databases
FunCoupENSG00000260032
BioGRIDLINC00657
STRING (EMBL)LINC00657
ZODIACLINC00657
Ontologies - Pathways
Huge Navigator LINC00657 [HugePedia]
snp3D : Map Gene to Disease647979
BioCentury BCIQLINC00657
ClinGenLINC00657
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD647979
Clinical trialLINC00657
Miscellaneous
canSAR (ICR)LINC00657 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00657
EVEXLINC00657
GoPubMedLINC00657
iHOPLINC00657
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:12:13 CET 2017

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