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LINC00658 (long intergenic non-protein coding RNA 658)

Identity

Other alias-
HGNC (Hugo) LINC00658
LocusID (NCBI) 100507629
Atlas_Id 65567
Location 20p12.3  [Link to chromosome band 20p12]
Location_base_pair Starts at 5431957 and ends at 5445748 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00658   44315
Cards
Entrez_Gene (NCBI)LINC00658  100507629  long intergenic non-protein coding RNA 658
Aliases
GeneCards (Weizmann)LINC00658
Ensembl hg19 (Hinxton)ENSG00000226995 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000226995 [Gene_View]  chr20:5431957-5445748 [Contig_View]  LINC00658 [Vega]
ICGC DataPortalENSG00000226995
TCGA cBioPortalLINC00658
AceView (NCBI)LINC00658
Genatlas (Paris)LINC00658
WikiGenes100507629
SOURCE (Princeton)LINC00658
Genetics Home Reference (NIH)LINC00658
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00658  -     chr20:5431957-5445748 -  20p12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00658  -     20p12.3   [Description]    (hg19-Feb_2009)
EnsemblLINC00658 - 20p12.3 [CytoView hg19]  LINC00658 - 20p12.3 [CytoView hg38]
Mapping of homologs : NCBILINC00658 [Mapview hg19]  LINC00658 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA983844 BC035192 BC048109
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00658
Cluster EST : UnigeneHs.121383 [ NCBI ]
CGAP (NCI)Hs.121383
Alternative Splicing GalleryENSG00000226995
Gene ExpressionLINC00658 [ NCBI-GEO ]   LINC00658 [ EBI - ARRAY_EXPRESS ]   LINC00658 [ SEEK ]   LINC00658 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00658 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507629
GTEX Portal (Tissue expression)LINC00658
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00658
DMDM Disease mutations100507629
Blocks (Seattle)LINC00658
Human Protein AtlasENSG00000226995
Protein Interaction databases
FunCoupENSG00000226995
BioGRIDLINC00658
STRING (EMBL)LINC00658
ZODIACLINC00658
Ontologies - Pathways
Huge Navigator LINC00658 [HugePedia]
snp3D : Map Gene to Disease100507629
BioCentury BCIQLINC00658
ClinGenLINC00658
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507629
Clinical trialLINC00658
Miscellaneous
canSAR (ICR)LINC00658 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00658
EVEXLINC00658
GoPubMedLINC00658
iHOPLINC00658
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:13:29 CEST 2017

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