Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LINC00662 (long intergenic non-protein coding RNA 662)

Identity

Alias (NCBI)-
HGNC (Hugo) LINC00662
LocusID (NCBI) 148189
Atlas_Id 57901
Location 19q11  [Link to chromosome band 19q11]
Location_base_pair Starts at 27790493 and ends at 27793940 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC00662   27122
Cards
Entrez_Gene (NCBI)LINC00662    long intergenic non-protein coding RNA 662
Aliases
GeneCards (Weizmann)LINC00662
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr19:27790493-27793940 [Contig_View]  LINC00662 [Vega]
TCGA cBioPortalLINC00662
AceView (NCBI)LINC00662
Genatlas (Paris)LINC00662
SOURCE (Princeton)LINC00662
Genetics Home Reference (NIH)LINC00662
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00662  -     chr19:27790493-27793940 -  19q11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00662  -     19q11   [Description]    (hg19-Feb_2009)
GoldenPathLINC00662 - 19q11 [CytoView hg19]  LINC00662 - 19q11 [CytoView hg38]
genome Data Viewer NCBILINC00662 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK055559 AK311452 BC045720
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00662
Gene ExpressionLINC00662 [ NCBI-GEO ]   LINC00662 [ EBI - ARRAY_EXPRESS ]   LINC00662 [ SEEK ]   LINC00662 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00662 [ Firebrowse - Broad ]
GenevisibleExpression of LINC00662 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)148189
GTEX Portal (Tissue expression)LINC00662
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00662
Blocks (Seattle)LINC00662
Protein Interaction databases
BioGRIDLINC00662
STRING (EMBL)LINC00662
ZODIACLINC00662
Ontologies - Pathways
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXLINC00662
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jan 1 18:22:27 CET 2021

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