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LINC00667 (long intergenic non-protein coding RNA 667)

Identity

Other alias-
HGNC (Hugo) LINC00667
LocusID (NCBI) 339290
Atlas_Id 65573
Location 18p11.31  [Link to chromosome band 18p11]
Location_base_pair Starts at 5238100 and ends at 5246506 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00667   27906
Cards
Entrez_Gene (NCBI)LINC00667  339290  long intergenic non-protein coding RNA 667
Aliases
GeneCards (Weizmann)LINC00667
Ensembl hg19 (Hinxton)ENSG00000263753 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000263753 [Gene_View]  chr18:5238100-5246506 [Contig_View]  LINC00667 [Vega]
ICGC DataPortalENSG00000263753
TCGA cBioPortalLINC00667
AceView (NCBI)LINC00667
Genatlas (Paris)LINC00667
WikiGenes339290
SOURCE (Princeton)LINC00667
Genetics Home Reference (NIH)LINC00667
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00667  -     chr18:5238100-5246506 +  18p11.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00667  -     18p11.31   [Description]    (hg19-Feb_2009)
EnsemblLINC00667 - 18p11.31 [CytoView hg19]  LINC00667 - 18p11.31 [CytoView hg38]
Mapping of homologs : NCBILINC00667 [Mapview hg19]  LINC00667 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC027873 BC119664 BC119665
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00667
Cluster EST : UnigeneHs.727464 [ NCBI ]
CGAP (NCI)Hs.727464
Alternative Splicing GalleryENSG00000263753
Gene ExpressionLINC00667 [ NCBI-GEO ]   LINC00667 [ EBI - ARRAY_EXPRESS ]   LINC00667 [ SEEK ]   LINC00667 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00667 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)339290
GTEX Portal (Tissue expression)LINC00667
Human Protein AtlasENSG00000263753-LINC00667 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00667
DMDM Disease mutations339290
Blocks (Seattle)LINC00667
Human Protein Atlas [tissue]ENSG00000263753-LINC00667 [tissue]
IPIIPI00807505   
Protein Interaction databases
FunCoupENSG00000263753
BioGRIDLINC00667
STRING (EMBL)LINC00667
ZODIACLINC00667
Ontologies - Pathways
Huge Navigator LINC00667 [HugePedia]
snp3D : Map Gene to Disease339290
BioCentury BCIQLINC00667
ClinGenLINC00667
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD339290
Clinical trialLINC00667
Miscellaneous
canSAR (ICR)LINC00667 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00667
EVEXLINC00667
GoPubMedLINC00667
iHOPLINC00667
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:54:46 CET 2017

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