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LINC00668 (long intergenic non-protein coding RNA 668)

Identity

Other alias-
HGNC (Hugo) LINC00668
LocusID (NCBI) 400643
Atlas_Id 65574
Location 18p11.31  [Link to chromosome band 18p11]
Location_base_pair Starts at 6925478 and ends at 6928552 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00668   44328
Cards
Entrez_Gene (NCBI)LINC00668  400643  long intergenic non-protein coding RNA 668
Aliases
GeneCards (Weizmann)LINC00668
Ensembl hg19 (Hinxton)ENSG00000265933 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000265933 [Gene_View]  chr18:6925478-6928552 [Contig_View]  LINC00668 [Vega]
ICGC DataPortalENSG00000265933
TCGA cBioPortalLINC00668
AceView (NCBI)LINC00668
Genatlas (Paris)LINC00668
WikiGenes400643
SOURCE (Princeton)LINC00668
Genetics Home Reference (NIH)LINC00668
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00668  -     chr18:6925478-6928552 -  18p11.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00668  -     18p11.31   [Description]    (hg19-Feb_2009)
EnsemblLINC00668 - 18p11.31 [CytoView hg19]  LINC00668 - 18p11.31 [CytoView hg38]
Mapping of homologs : NCBILINC00668 [Mapview hg19]  LINC00668 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK095347 AK097613 BC035413
RefSeq transcript (Entrez)NM_001103383
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00668
Cluster EST : UnigeneHs.253920 [ NCBI ]
CGAP (NCI)Hs.253920
Alternative Splicing GalleryENSG00000265933
Gene ExpressionLINC00668 [ NCBI-GEO ]   LINC00668 [ EBI - ARRAY_EXPRESS ]   LINC00668 [ SEEK ]   LINC00668 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00668 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)400643
GTEX Portal (Tissue expression)LINC00668
Human Protein AtlasENSG00000265933-LINC00668 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00668
DMDM Disease mutations400643
Blocks (Seattle)LINC00668
Human Protein Atlas [tissue]ENSG00000265933-LINC00668 [tissue]
IPIIPI00977450   
Protein Interaction databases
FunCoupENSG00000265933
BioGRIDLINC00668
STRING (EMBL)LINC00668
ZODIACLINC00668
Ontologies - Pathways
Huge Navigator LINC00668 [HugePedia]
snp3D : Map Gene to Disease400643
BioCentury BCIQLINC00668
ClinGenLINC00668
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD400643
Clinical trialLINC00668
Miscellaneous
canSAR (ICR)LINC00668 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00668
EVEXLINC00668
GoPubMedLINC00668
iHOPLINC00668
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:54:46 CET 2017

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