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LINC00671 (long intergenic non-protein coding RNA 671)

Identity

Other alias-
HGNC (Hugo) LINC00671
LocusID (NCBI) 388387
Atlas_Id 65577
Location 17q21.31  [Link to chromosome band 17q21]
Location_base_pair Starts at 42874674 and ends at 42898704 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00671   44339
Cards
Entrez_Gene (NCBI)LINC00671  388387  long intergenic non-protein coding RNA 671
Aliases
GeneCards (Weizmann)LINC00671
Ensembl hg19 (Hinxton)ENSG00000213373 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000213373 [Gene_View]  chr17:42874674-42898704 [Contig_View]  LINC00671 [Vega]
ICGC DataPortalENSG00000213373
TCGA cBioPortalLINC00671
AceView (NCBI)LINC00671
Genatlas (Paris)LINC00671
WikiGenes388387
SOURCE (Princeton)LINC00671
Genetics Home Reference (NIH)LINC00671
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00671  -     chr17:42874674-42898704 -  17q21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00671  -     17q21.31   [Description]    (hg19-Feb_2009)
EnsemblLINC00671 - 17q21.31 [CytoView hg19]  LINC00671 - 17q21.31 [CytoView hg38]
Mapping of homologs : NCBILINC00671 [Mapview hg19]  LINC00671 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK055784 AK298293 BC122867 BC122868 DC361857
RefSeq transcript (Entrez)NM_207388
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00671
Cluster EST : UnigeneHs.632257 [ NCBI ]
CGAP (NCI)Hs.632257
Alternative Splicing GalleryENSG00000213373
Gene ExpressionLINC00671 [ NCBI-GEO ]   LINC00671 [ EBI - ARRAY_EXPRESS ]   LINC00671 [ SEEK ]   LINC00671 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00671 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)388387
GTEX Portal (Tissue expression)LINC00671
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00671
DMDM Disease mutations388387
Blocks (Seattle)LINC00671
Human Protein AtlasENSG00000213373
HPRD13404
IPIIPI00910065   IPI00043541   
Protein Interaction databases
FunCoupENSG00000213373
BioGRIDLINC00671
STRING (EMBL)LINC00671
ZODIACLINC00671
Ontologies - Pathways
Huge Navigator LINC00671 [HugePedia]
snp3D : Map Gene to Disease388387
BioCentury BCIQLINC00671
ClinGenLINC00671
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD388387
Clinical trialLINC00671
Miscellaneous
canSAR (ICR)LINC00671 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00671
EVEXLINC00671
GoPubMedLINC00671
iHOPLINC00671
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:57:11 CEST 2017

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