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LINC00678 (long intergenic non-protein coding RNA 678)

Identity

Other alias-
HGNC (Hugo) LINC00678
LocusID (NCBI) 101410541
Atlas_Id 65583
Location 11p14.1  [Link to chromosome band 11p14]
Location_base_pair Starts at 27617626 and ends at 27634627 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00678   44413
Cards
Entrez_Gene (NCBI)LINC00678  101410541  long intergenic non-protein coding RNA 678
Aliases
GeneCards (Weizmann)LINC00678
Ensembl hg19 (Hinxton)ENSG00000254934 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000254934 [Gene_View]  chr11:27617626-27634627 [Contig_View]  LINC00678 [Vega]
ICGC DataPortalENSG00000254934
TCGA cBioPortalLINC00678
AceView (NCBI)LINC00678
Genatlas (Paris)LINC00678
WikiGenes101410541
SOURCE (Princeton)LINC00678
Genetics Home Reference (NIH)LINC00678
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00678  -     chr11:27617626-27634627 -  11p14.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00678  -     11p14.1   [Description]    (hg19-Feb_2009)
EnsemblLINC00678 - 11p14.1 [CytoView hg19]  LINC00678 - 11p14.1 [CytoView hg38]
Mapping of homologs : NCBILINC00678 [Mapview hg19]  LINC00678 [Mapview hg38]
Gene and transcription
Genbank (Entrez)CD049147 CD049808 CD176172 CN283585 EF565102
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00678
Cluster EST : UnigeneHs.639639 [ NCBI ]
CGAP (NCI)Hs.639639
Alternative Splicing GalleryENSG00000254934
Gene ExpressionLINC00678 [ NCBI-GEO ]   LINC00678 [ EBI - ARRAY_EXPRESS ]   LINC00678 [ SEEK ]   LINC00678 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00678 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101410541
GTEX Portal (Tissue expression)LINC00678
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00678
DMDM Disease mutations101410541
Blocks (Seattle)LINC00678
Human Protein AtlasENSG00000254934
Protein Interaction databases
FunCoupENSG00000254934
BioGRIDLINC00678
STRING (EMBL)LINC00678
ZODIACLINC00678
Ontologies - Pathways
Huge Navigator LINC00678 [HugePedia]
snp3D : Map Gene to Disease101410541
BioCentury BCIQLINC00678
ClinGenLINC00678
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101410541
Clinical trialLINC00678
Miscellaneous
canSAR (ICR)LINC00678 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00678
EVEXLINC00678
GoPubMedLINC00678
iHOPLINC00678
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 11:20:53 CEST 2017

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