Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LINC00680-GUSBP4 (LINC00680-GUSBP4 readthrough)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 106660613
Atlas_Id 77847
Location 6p11.2  [Link to chromosome band 6p11]
Location_base_pair Starts at 57919881 and ends at 57961446 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LINC00680-GUSBP4  106660613  LINC00680-GUSBP4 readthrough
Aliases
GeneCards (Weizmann)LINC00680-GUSBP4
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:57919881-57961446 [Contig_View]  LINC00680-GUSBP4 [Vega]
TCGA cBioPortalLINC00680-GUSBP4
AceView (NCBI)LINC00680-GUSBP4
Genatlas (Paris)LINC00680-GUSBP4
WikiGenes106660613
SOURCE (Princeton)LINC00680-GUSBP4
Genetics Home Reference (NIH)LINC00680-GUSBP4
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00680-GUSBP4  -     chr6:57919881-57961446 -  6p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00680-GUSBP4  -     6p11.2   [Description]    (hg19-Feb_2009)
EnsemblLINC00680-GUSBP4 - 6p11.2 [CytoView hg19]  LINC00680-GUSBP4 - 6p11.2 [CytoView hg38]
Mapping of homologs : NCBILINC00680-GUSBP4 [Mapview hg19]  LINC00680-GUSBP4 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC144584 BC144585 BM553931 DA269273
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00680-GUSBP4
Cluster EST : UnigeneHs.561539 [ NCBI ]
CGAP (NCI)Hs.561539
Gene ExpressionLINC00680-GUSBP4 [ NCBI-GEO ]   LINC00680-GUSBP4 [ EBI - ARRAY_EXPRESS ]   LINC00680-GUSBP4 [ SEEK ]   LINC00680-GUSBP4 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00680-GUSBP4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)106660613
GTEX Portal (Tissue expression)LINC00680-GUSBP4
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00680-GUSBP4
DMDM Disease mutations106660613
Blocks (Seattle)LINC00680-GUSBP4
Protein Interaction databases
BioGRIDLINC00680-GUSBP4
STRING (EMBL)LINC00680-GUSBP4
ZODIACLINC00680-GUSBP4
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease106660613
BioCentury BCIQLINC00680-GUSBP4
ClinGenLINC00680-GUSBP4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD106660613
Clinical trialLINC00680-GUSBP4
Miscellaneous
canSAR (ICR)LINC00680-GUSBP4 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00680-GUSBP4
EVEXLINC00680-GUSBP4
GoPubMedLINC00680-GUSBP4
iHOPLINC00680-GUSBP4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:53:23 CEST 2018

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