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LINC00682 (long intergenic non-protein coding RNA 682)

Identity

Other alias-
HGNC (Hugo) LINC00682
LocusID (NCBI) 101927074
Atlas_Id 65585
Location 4p13  [Link to chromosome band 4p13]
Location_base_pair Starts at 41879521 and ends at 41882611 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00682   44466
Cards
Entrez_Gene (NCBI)LINC00682  101927074  long intergenic non-protein coding RNA 682
Aliases
GeneCards (Weizmann)LINC00682
Ensembl hg19 (Hinxton)ENSG00000245870 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000245870 [Gene_View]  chr4:41879521-41882611 [Contig_View]  LINC00682 [Vega]
ICGC DataPortalENSG00000245870
TCGA cBioPortalLINC00682
AceView (NCBI)LINC00682
Genatlas (Paris)LINC00682
WikiGenes101927074
SOURCE (Princeton)LINC00682
Genetics Home Reference (NIH)LINC00682
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00682  -     chr4:41879521-41882611 -  4p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00682  -     4p13   [Description]    (hg19-Feb_2009)
EnsemblLINC00682 - 4p13 [CytoView hg19]  LINC00682 - 4p13 [CytoView hg38]
Mapping of homologs : NCBILINC00682 [Mapview hg19]  LINC00682 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL521949 BC025350 DA908871
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00682
Cluster EST : UnigeneHs.611425 [ NCBI ]
CGAP (NCI)Hs.611425
Alternative Splicing GalleryENSG00000245870
Gene ExpressionLINC00682 [ NCBI-GEO ]   LINC00682 [ EBI - ARRAY_EXPRESS ]   LINC00682 [ SEEK ]   LINC00682 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00682 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927074
GTEX Portal (Tissue expression)LINC00682
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00682
DMDM Disease mutations101927074
Blocks (Seattle)LINC00682
Human Protein AtlasENSG00000245870
Protein Interaction databases
FunCoupENSG00000245870
BioGRIDLINC00682
STRING (EMBL)LINC00682
ZODIACLINC00682
Ontologies - Pathways
Huge Navigator LINC00682 [HugePedia]
snp3D : Map Gene to Disease101927074
BioCentury BCIQLINC00682
ClinGenLINC00682
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927074
Clinical trialLINC00682
Miscellaneous
canSAR (ICR)LINC00682 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00682
EVEXLINC00682
GoPubMedLINC00682
iHOPLINC00682
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:13:32 CEST 2017

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