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LINC00689 (long intergenic non-protein coding RNA 689)

Identity

Other alias-
HGNC (Hugo) LINC00689
LocusID (NCBI) 154822
Atlas_Id 65590
Location 7q36.3  [Link to chromosome band 7q36]
Location_base_pair Starts at 158823456 and ends at 158827308 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00689   27217
Cards
Entrez_Gene (NCBI)LINC00689  154822  long intergenic non-protein coding RNA 689
Aliases
GeneCards (Weizmann)LINC00689
Ensembl hg19 (Hinxton)ENSG00000231419 [Gene_View]  chr7:158823456-158827308 [Contig_View]  LINC00689 [Vega]
Ensembl hg38 (Hinxton)ENSG00000231419 [Gene_View]  chr7:158823456-158827308 [Contig_View]  LINC00689 [Vega]
ICGC DataPortalENSG00000231419
TCGA cBioPortalLINC00689
AceView (NCBI)LINC00689
Genatlas (Paris)LINC00689
WikiGenes154822
SOURCE (Princeton)LINC00689
Genetics Home Reference (NIH)LINC00689
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00689  -     chr7:158823456-158827308 +  7q36.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00689  -     7q36.3   [Description]    (hg38-Dec_2013)
EnsemblLINC00689 - 7q36.3 [CytoView hg19]  LINC00689 - 7q36.3 [CytoView hg38]
Mapping of homologs : NCBILINC00689 [Mapview hg19]  LINC00689 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK125809 BC013024 BC024307 BC041429 BC042556
RefSeq transcript (Entrez)NM_198345
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007933 NW_004929334
Consensus coding sequences : CCDS (NCBI)LINC00689
Cluster EST : UnigeneHs.667767 [ NCBI ]
CGAP (NCI)Hs.667767
Alternative Splicing GalleryENSG00000231419
Gene ExpressionLINC00689 [ NCBI-GEO ]   LINC00689 [ EBI - ARRAY_EXPRESS ]   LINC00689 [ SEEK ]   LINC00689 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00689 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)154822
GTEX Portal (Tissue expression)LINC00689
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00689
DMDM Disease mutations154822
Blocks (Seattle)LINC00689
Human Protein AtlasENSG00000231419
IPIIPI00977454   IPI00843779   
Protein Interaction databases
FunCoupENSG00000231419
BioGRIDLINC00689
STRING (EMBL)LINC00689
ZODIACLINC00689
Ontologies - Pathways
Huge Navigator LINC00689 [HugePedia]
snp3D : Map Gene to Disease154822
BioCentury BCIQLINC00689
ClinGenLINC00689
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD154822
Clinical trialLINC00689
Miscellaneous
canSAR (ICR)LINC00689 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00689
EVEXLINC00689
GoPubMedLINC00689
iHOPLINC00689
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 12:12:19 CET 2017

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