Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LINC00692 (long intergenic non-protein coding RNA 692)

Identity

Other alias-
HGNC (Hugo) LINC00692
LocusID (NCBI) 285326
Atlas_Id 65593
Location 3p24.2  [Link to chromosome band 3p24]
Location_base_pair Starts at 25858532 and ends at 25873695 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00692   27708
Cards
Entrez_Gene (NCBI)LINC00692  285326  long intergenic non-protein coding RNA 692
Aliases
GeneCards (Weizmann)LINC00692
Ensembl hg19 (Hinxton)ENSG00000230891 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000230891 [Gene_View]  chr3:25858532-25873695 [Contig_View]  LINC00692 [Vega]
ICGC DataPortalENSG00000230891
TCGA cBioPortalLINC00692
AceView (NCBI)LINC00692
Genatlas (Paris)LINC00692
WikiGenes285326
SOURCE (Princeton)LINC00692
Genetics Home Reference (NIH)LINC00692
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00692  -     chr3:25858532-25873695 -  3p24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00692  -     3p24.2   [Description]    (hg19-Feb_2009)
EnsemblLINC00692 - 3p24.2 [CytoView hg19]  LINC00692 - 3p24.2 [CytoView hg38]
Mapping of homologs : NCBILINC00692 [Mapview hg19]  LINC00692 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC033370 BC126324 BC143987 BC143998 BC143999
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00692
Cluster EST : UnigeneHs.145246 [ NCBI ]
CGAP (NCI)Hs.145246
Alternative Splicing GalleryENSG00000230891
Gene ExpressionLINC00692 [ NCBI-GEO ]   LINC00692 [ EBI - ARRAY_EXPRESS ]   LINC00692 [ SEEK ]   LINC00692 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00692 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)285326
GTEX Portal (Tissue expression)LINC00692
Human Protein AtlasENSG00000230891-LINC00692 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00692
DMDM Disease mutations285326
Blocks (Seattle)LINC00692
Human Protein Atlas [tissue]ENSG00000230891-LINC00692 [tissue]
IPIIPI00744942   
Protein Interaction databases
FunCoupENSG00000230891
BioGRIDLINC00692
STRING (EMBL)LINC00692
ZODIACLINC00692
Ontologies - Pathways
Huge Navigator LINC00692 [HugePedia]
snp3D : Map Gene to Disease285326
BioCentury BCIQLINC00692
ClinGenLINC00692
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD285326
Clinical trialLINC00692
Miscellaneous
canSAR (ICR)LINC00692 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00692
EVEXLINC00692
GoPubMedLINC00692
iHOPLINC00692
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMedLast year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:07:50 CET 2017

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