Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LINC00701 (long intergenic non-protein coding RNA 701)

Identity

Alias (NCBI)-
HGNC (Hugo) LINC00701
LocusID (NCBI) 399708
Atlas_Id 65598
Location 10p15.3  [Link to chromosome band 10p15]
Location_base_pair Starts at 2300319 and ends at 2315074 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC00701   44674
Cards
Entrez_Gene (NCBI)LINC00701    long intergenic non-protein coding RNA 701
Aliases
GeneCards (Weizmann)LINC00701
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr10:2300319-2315074 [Contig_View]  LINC00701 [Vega]
TCGA cBioPortalLINC00701
AceView (NCBI)LINC00701
Genatlas (Paris)LINC00701
SOURCE (Princeton)LINC00701
Genetics Home Reference (NIH)LINC00701
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00701  -     chr10:2300319-2315074 -  10p15.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00701  -     10p15.3   [Description]    (hg19-Feb_2009)
GoldenPathLINC00701 - 10p15.3 [CytoView hg19]  LINC00701 - 10p15.3 [CytoView hg38]
Genome Data Viewer NCBILINC00701 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC055423
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00701
Gene ExpressionLINC00701 [ NCBI-GEO ]   LINC00701 [ EBI - ARRAY_EXPRESS ]   LINC00701 [ SEEK ]   LINC00701 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00701 [ Firebrowse - Broad ]
GenevisibleExpression of LINC00701 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)399708
GTEX Portal (Tissue expression)LINC00701
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00701
Protein Interaction databases
BioGRIDLINC00701
STRING (EMBL)LINC00701
ZODIACLINC00701
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXLINC00701
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:56:36 CEST 2021

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