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LINC00701 (long intergenic non-protein coding RNA 701)

Identity

Other alias-
HGNC (Hugo) LINC00701
LocusID (NCBI) 399708
Atlas_Id 65598
Location 10p15.3  [Link to chromosome band 10p15]
Location_base_pair Starts at 2300319 and ends at 2315074 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00701   44674
Cards
Entrez_Gene (NCBI)LINC00701  399708  long intergenic non-protein coding RNA 701
Aliases
GeneCards (Weizmann)LINC00701
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr10:2300319-2315074 [Contig_View]  LINC00701 [Vega]
TCGA cBioPortalLINC00701
AceView (NCBI)LINC00701
Genatlas (Paris)LINC00701
WikiGenes399708
SOURCE (Princeton)LINC00701
Genetics Home Reference (NIH)LINC00701
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00701  -     chr10:2300319-2315074 -  10p15.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00701  -     10p15.3   [Description]    (hg19-Feb_2009)
EnsemblLINC00701 - 10p15.3 [CytoView hg19]  LINC00701 - 10p15.3 [CytoView hg38]
Mapping of homologs : NCBILINC00701 [Mapview hg19]  LINC00701 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC055423
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00701
Cluster EST : UnigeneHs.521270 [ NCBI ]
CGAP (NCI)Hs.521270
Gene ExpressionLINC00701 [ NCBI-GEO ]   LINC00701 [ EBI - ARRAY_EXPRESS ]   LINC00701 [ SEEK ]   LINC00701 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00701 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)399708
GTEX Portal (Tissue expression)LINC00701
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00701
DMDM Disease mutations399708
Blocks (Seattle)LINC00701
IPIIPI00743366   
Protein Interaction databases
BioGRIDLINC00701
STRING (EMBL)LINC00701
ZODIACLINC00701
Ontologies - Pathways
Huge Navigator LINC00701 [HugePedia]
snp3D : Map Gene to Disease399708
BioCentury BCIQLINC00701
ClinGenLINC00701
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD399708
Clinical trialLINC00701
Miscellaneous
canSAR (ICR)LINC00701 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00701
EVEXLINC00701
GoPubMedLINC00701
iHOPLINC00701
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:21:48 CET 2017

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