Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC00709 (long intergenic non-protein coding RNA 709)


Alias (NCBI)-
HGNC (Hugo) LINC00709
LocusID (NCBI) 100507163
Atlas_Id 65606
Location 10p14  [Link to chromosome band 10p14]
Location_base_pair Starts at 9275613 and ends at 9287056 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC00709   44700
Entrez_Gene (NCBI)LINC00709    long intergenic non-protein coding RNA 709
GeneCards (Weizmann)LINC00709
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr10:9275613-9287056 [Contig_View]  LINC00709 [Vega]
TCGA cBioPortalLINC00709
AceView (NCBI)LINC00709
Genatlas (Paris)LINC00709
SOURCE (Princeton)LINC00709
Genetics Home Reference (NIH)LINC00709
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00709  -     chr10:9275613-9287056 +  10p14   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00709  -     10p14   [Description]    (hg19-Feb_2009)
GoldenPathLINC00709 - 10p14 [CytoView hg19]  LINC00709 - 10p14 [CytoView hg38]
Genome Data Viewer NCBILINC00709 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AA846132 BX111793
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00709
Gene ExpressionLINC00709 [ NCBI-GEO ]   LINC00709 [ EBI - ARRAY_EXPRESS ]   LINC00709 [ SEEK ]   LINC00709 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00709 [ Firebrowse - Broad ]
GenevisibleExpression of LINC00709 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100507163
GTEX Portal (Tissue expression)LINC00709
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00709
Protein Interaction databases
Ontologies - Pathways
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:56:37 CEST 2021

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