Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC00836 (long intergenic non-protein coding RNA 836)


Alias (NCBI)-
HGNC (Hugo) LINC00836
LocusID (NCBI) 101929052
Atlas_Id 65609
Location 10p12.1  [Link to chromosome band 10p12]
Location_base_pair Starts at 25651712 and ends at 25683385 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC00836   44915
Entrez_Gene (NCBI)LINC00836    long intergenic non-protein coding RNA 836
GeneCards (Weizmann)LINC00836
Ensembl hg19 (Hinxton)ENSG00000280809 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000280809 [Gene_View]  ENSG00000280809 [Sequence]  chr10:25651712-25683385 [Contig_View]  LINC00836 [Vega]
ICGC DataPortalENSG00000280809
TCGA cBioPortalLINC00836
AceView (NCBI)LINC00836
Genatlas (Paris)LINC00836
SOURCE (Princeton)LINC00836
Genetics Home Reference (NIH)LINC00836
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00836  -     chr10:25651712-25683385 +  10p12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00836  -     10p12.1   [Description]    (hg19-Feb_2009)
GoldenPathLINC00836 - 10p12.1 [CytoView hg19]  LINC00836 - 10p12.1 [CytoView hg38]
Genome Data Viewer NCBILINC00836 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK123440 BE856605 BF435290 BX100192 DA169579
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00836
Gene ExpressionLINC00836 [ NCBI-GEO ]   LINC00836 [ EBI - ARRAY_EXPRESS ]   LINC00836 [ SEEK ]   LINC00836 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00836 [ Firebrowse - Broad ]
GenevisibleExpression of LINC00836 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101929052
GTEX Portal (Tissue expression)LINC00836
Human Protein AtlasENSG00000280809-LINC00836 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00836
Human Protein Atlas [tissue]ENSG00000280809-LINC00836 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:56:38 CEST 2021

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