Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC00836 (long intergenic non-protein coding RNA 836)

Identity

Other alias-
HGNC (Hugo) LINC00836
LocusID (NCBI) 101929052
Atlas_Id 65609
Location 10p12.1  [Link to chromosome band 10p12]
Location_base_pair Starts at 25651712 and ends at 25732935 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00836   44915
Cards
Entrez_Gene (NCBI)LINC00836  101929052  long intergenic non-protein coding RNA 836
Aliases
GeneCards (Weizmann)LINC00836
Ensembl hg19 (Hinxton)ENSG00000280809 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000280809 [Gene_View]  chr10:25651712-25732935 [Contig_View]  LINC00836 [Vega]
ICGC DataPortalENSG00000280809
TCGA cBioPortalLINC00836
AceView (NCBI)LINC00836
Genatlas (Paris)LINC00836
WikiGenes101929052
SOURCE (Princeton)LINC00836
Genetics Home Reference (NIH)LINC00836
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00836  -     chr10:25651712-25732935 +  10p12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00836  -     10p12.1   [Description]    (hg19-Feb_2009)
EnsemblLINC00836 - 10p12.1 [CytoView hg19]  LINC00836 - 10p12.1 [CytoView hg38]
Mapping of homologs : NCBILINC00836 [Mapview hg19]  LINC00836 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK123440 BE856605 BF435290 BX100192 DA169579
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00836
Cluster EST : UnigeneHs.128298 [ NCBI ]
CGAP (NCI)Hs.128298
Alternative Splicing GalleryENSG00000280809
Gene ExpressionLINC00836 [ NCBI-GEO ]   LINC00836 [ EBI - ARRAY_EXPRESS ]   LINC00836 [ SEEK ]   LINC00836 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00836 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929052
GTEX Portal (Tissue expression)LINC00836
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00836
DMDM Disease mutations101929052
Blocks (Seattle)LINC00836
Human Protein AtlasENSG00000280809
Protein Interaction databases
FunCoupENSG00000280809
BioGRIDLINC00836
STRING (EMBL)LINC00836
ZODIACLINC00836
Ontologies - Pathways
Huge Navigator LINC00836 [HugePedia]
snp3D : Map Gene to Disease101929052
BioCentury BCIQLINC00836
ClinGenLINC00836
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929052
Clinical trialLINC00836
Miscellaneous
canSAR (ICR)LINC00836 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00836
EVEXLINC00836
GoPubMedLINC00836
iHOPLINC00836
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:57:21 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.