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LINC00836 (long intergenic non-protein coding RNA 836)

Identity

Alias (NCBI)-
HGNC (Hugo) LINC00836
LocusID (NCBI) 101929052
Atlas_Id 65609
Location 10p12.1  [Link to chromosome band 10p12]
Location_base_pair Starts at 25651712 and ends at 25683385 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC00836   44915
Cards
Entrez_Gene (NCBI)LINC00836    long intergenic non-protein coding RNA 836
Aliases
GeneCards (Weizmann)LINC00836
Ensembl hg19 (Hinxton)ENSG00000280809 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000280809 [Gene_View]  ENSG00000280809 [Sequence]  chr10:25651712-25683385 [Contig_View]  LINC00836 [Vega]
ICGC DataPortalENSG00000280809
TCGA cBioPortalLINC00836
AceView (NCBI)LINC00836
Genatlas (Paris)LINC00836
SOURCE (Princeton)LINC00836
Genetics Home Reference (NIH)LINC00836
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00836  -     chr10:25651712-25683385 +  10p12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00836  -     10p12.1   [Description]    (hg19-Feb_2009)
GoldenPathLINC00836 - 10p12.1 [CytoView hg19]  LINC00836 - 10p12.1 [CytoView hg38]
ImmunoBaseENSG00000280809
Genome Data Viewer NCBILINC00836 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK123440 BE856605 BF435290 BX100192 DA169579
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00836
Gene ExpressionLINC00836 [ NCBI-GEO ]   LINC00836 [ EBI - ARRAY_EXPRESS ]   LINC00836 [ SEEK ]   LINC00836 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00836 [ Firebrowse - Broad ]
GenevisibleExpression of LINC00836 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101929052
GTEX Portal (Tissue expression)LINC00836
Human Protein AtlasENSG00000280809-LINC00836 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00836
Human Protein Atlas [tissue]ENSG00000280809-LINC00836 [tissue]
Protein Interaction databases
BioGRIDLINC00836
STRING (EMBL)LINC00836
ZODIACLINC00836
Ontologies - Pathways
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXLINC00836
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:56:38 CEST 2021

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