Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC00837 (long intergenic non-protein coding RNA 837)

Identity

Alias (NCBI)-
HGNC (Hugo) LINC00837
LocusID (NCBI) 100507605
Atlas_Id 65610
Location 10p12.1  [Link to chromosome band 10p12]
Location_base_pair Starts at 28789311 and ends at 28796050 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC00837   27436
Cards
Entrez_Gene (NCBI)LINC00837    long intergenic non-protein coding RNA 837
Aliases
GeneCards (Weizmann)LINC00837
Ensembl hg19 (Hinxton)ENSG00000235824 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235824 [Gene_View]  ENSG00000235824 [Sequence]  chr10:28789311-28796050 [Contig_View]  LINC00837 [Vega]
ICGC DataPortalENSG00000235824
TCGA cBioPortalLINC00837
AceView (NCBI)LINC00837
Genatlas (Paris)LINC00837
SOURCE (Princeton)LINC00837
Genetics Home Reference (NIH)LINC00837
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00837  -     chr10:28789311-28796050 -  10p12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00837  -     10p12.1   [Description]    (hg19-Feb_2009)
GoldenPathLINC00837 - 10p12.1 [CytoView hg19]  LINC00837 - 10p12.1 [CytoView hg38]
ImmunoBaseENSG00000235824
Genome Data Viewer NCBILINC00837 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AL080132 BC028422 DB072413 DB091920 DB099527
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00837
Gene ExpressionLINC00837 [ NCBI-GEO ]   LINC00837 [ EBI - ARRAY_EXPRESS ]   LINC00837 [ SEEK ]   LINC00837 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00837 [ Firebrowse - Broad ]
GenevisibleExpression of LINC00837 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100507605
GTEX Portal (Tissue expression)LINC00837
Human Protein AtlasENSG00000235824-LINC00837 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00837
Human Protein Atlas [tissue]ENSG00000235824-LINC00837 [tissue]
Protein Interaction databases
BioGRIDLINC00837
STRING (EMBL)LINC00837
ZODIACLINC00837
Ontologies - Pathways
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXLINC00837
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:56:38 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.