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LINC00840 (long intergenic non-protein coding RNA 840)

Identity

Other alias-
HGNC (Hugo) LINC00840
LocusID (NCBI) 100506835
Atlas_Id 65612
Location 10q11.21  [Link to chromosome band 10q11]
Location_base_pair Starts at 43859411 and ends at 43895433 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00840   44987
Cards
Entrez_Gene (NCBI)LINC00840  100506835  long intergenic non-protein coding RNA 840
Aliases
GeneCards (Weizmann)LINC00840
Ensembl hg19 (Hinxton)ENSG00000226808 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000226808 [Gene_View]  chr10:43859411-43895433 [Contig_View]  LINC00840 [Vega]
ICGC DataPortalENSG00000226808
TCGA cBioPortalLINC00840
AceView (NCBI)LINC00840
Genatlas (Paris)LINC00840
WikiGenes100506835
SOURCE (Princeton)LINC00840
Genetics Home Reference (NIH)LINC00840
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00840  -     chr10:43859411-43895433 +  10q11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00840  -     10q11.21   [Description]    (hg19-Feb_2009)
EnsemblLINC00840 - 10q11.21 [CytoView hg19]  LINC00840 - 10q11.21 [CytoView hg38]
Mapping of homologs : NCBILINC00840 [Mapview hg19]  LINC00840 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK054825
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00840
Cluster EST : UnigeneHs.462615 [ NCBI ]
CGAP (NCI)Hs.462615
Alternative Splicing GalleryENSG00000226808
Gene ExpressionLINC00840 [ NCBI-GEO ]   LINC00840 [ EBI - ARRAY_EXPRESS ]   LINC00840 [ SEEK ]   LINC00840 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00840 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506835
GTEX Portal (Tissue expression)LINC00840
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00840
DMDM Disease mutations100506835
Blocks (Seattle)LINC00840
Human Protein AtlasENSG00000226808
Protein Interaction databases
FunCoupENSG00000226808
BioGRIDLINC00840
STRING (EMBL)LINC00840
ZODIACLINC00840
Ontologies - Pathways
Huge Navigator LINC00840 [HugePedia]
snp3D : Map Gene to Disease100506835
BioCentury BCIQLINC00840
ClinGenLINC00840
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506835
Clinical trialLINC00840
Miscellaneous
canSAR (ICR)LINC00840 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00840
EVEXLINC00840
GoPubMedLINC00840
iHOPLINC00840
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:13:36 CEST 2017

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