Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LINC00844 (long intergenic non-protein coding RNA 844)

Identity

Alias (NCBI)-
HGNC (Hugo) LINC00844
LocusID (NCBI) 100507008
Atlas_Id 58375
Location 10q21.1  [Link to chromosome band 10q21]
Location_base_pair Starts at 58999518 and ends at 59001617 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC00844   45031
Cards
Entrez_Gene (NCBI)LINC00844    long intergenic non-protein coding RNA 844
Aliases
GeneCards (Weizmann)LINC00844
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr10:58999518-59001617 [Contig_View]  LINC00844 [Vega]
TCGA cBioPortalLINC00844
AceView (NCBI)LINC00844
Genatlas (Paris)LINC00844
SOURCE (Princeton)LINC00844
Genetics Home Reference (NIH)LINC00844
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00844  -     chr10:58999518-59001617 +  10q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00844  -     10q21.1   [Description]    (hg19-Feb_2009)
GoldenPathLINC00844 - 10q21.1 [CytoView hg19]  LINC00844 - 10q21.1 [CytoView hg38]
Genome Data Viewer NCBILINC00844 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)CB157564 DA153602 DB500612
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00844
Gene ExpressionLINC00844 [ NCBI-GEO ]   LINC00844 [ EBI - ARRAY_EXPRESS ]   LINC00844 [ SEEK ]   LINC00844 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00844 [ Firebrowse - Broad ]
GenevisibleExpression of LINC00844 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100507008
GTEX Portal (Tissue expression)LINC00844
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00844
Protein Interaction databases
BioGRIDLINC00844
STRING (EMBL)LINC00844
ZODIACLINC00844
Ontologies - Pathways
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXLINC00844
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:16:09 CEST 2021

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