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LINC00845 (long intergenic non-protein coding RNA 845)

Identity

Alias (NCBI)-
HGNC (Hugo) LINC00845
LocusID (NCBI) 100507058
Atlas_Id 65616
Location 10q21.2  [Link to chromosome band 10q21]
Location_base_pair Starts at 61016275 and ends at 61026417 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC00845   45033
Cards
Entrez_Gene (NCBI)LINC00845    long intergenic non-protein coding RNA 845
Aliases
GeneCards (Weizmann)LINC00845
Ensembl hg19 (Hinxton)ENSG00000227244 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000227244 [Gene_View]  ENSG00000227244 [Sequence]  chr10:61016275-61026417 [Contig_View]  LINC00845 [Vega]
ICGC DataPortalENSG00000227244
TCGA cBioPortalLINC00845
AceView (NCBI)LINC00845
Genatlas (Paris)LINC00845
SOURCE (Princeton)LINC00845
Genetics Home Reference (NIH)LINC00845
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00845  -     chr10:61016275-61026417 +  10q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00845  -     10q21.2   [Description]    (hg19-Feb_2009)
GoldenPathLINC00845 - 10q21.2 [CytoView hg19]  LINC00845 - 10q21.2 [CytoView hg38]
ImmunoBaseENSG00000227244
Genome Data Viewer NCBILINC00845 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AI792470 AW000921
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00845
Gene ExpressionLINC00845 [ NCBI-GEO ]   LINC00845 [ EBI - ARRAY_EXPRESS ]   LINC00845 [ SEEK ]   LINC00845 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00845 [ Firebrowse - Broad ]
GenevisibleExpression of LINC00845 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100507058
GTEX Portal (Tissue expression)LINC00845
Human Protein AtlasENSG00000227244-LINC00845 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00845
Human Protein Atlas [tissue]ENSG00000227244-LINC00845 [tissue]
Protein Interaction databases
BioGRIDLINC00845
STRING (EMBL)LINC00845
ZODIACLINC00845
Ontologies - Pathways
Litterature
GeneRIFsGene References Into Functions (Entrez)
EVEXLINC00845
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:56:39 CEST 2021

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