Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC00845 (long intergenic non-protein coding RNA 845)

Identity

Other alias-
HGNC (Hugo) LINC00845
LocusID (NCBI) 100507058
Atlas_Id 65616
Location 10q21.2  [Link to chromosome band 10q21]
Location_base_pair Starts at 62776033 and ends at 62786175 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00845   45033
Cards
Entrez_Gene (NCBI)LINC00845  100507058  long intergenic non-protein coding RNA 845
Aliases
GeneCards (Weizmann)LINC00845
Ensembl hg19 (Hinxton)ENSG00000227244 [Gene_View]  chr10:62776033-62786175 [Contig_View]  LINC00845 [Vega]
Ensembl hg38 (Hinxton)ENSG00000227244 [Gene_View]  chr10:62776033-62786175 [Contig_View]  LINC00845 [Vega]
ICGC DataPortalENSG00000227244
TCGA cBioPortalLINC00845
AceView (NCBI)LINC00845
Genatlas (Paris)LINC00845
WikiGenes100507058
SOURCE (Princeton)LINC00845
Genetics Home Reference (NIH)LINC00845
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00845  -     chr10:62776033-62786175 +  10q21.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00845  -     10q21.2   [Description]    (hg38-Dec_2013)
EnsemblLINC00845 - 10q21.2 [CytoView hg19]  LINC00845 - 10q21.2 [CytoView hg38]
Mapping of homologs : NCBILINC00845 [Mapview hg19]  LINC00845 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI792470 AW000921 HG502937
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000010 NC_018921 NT_030059 NW_004929376
Consensus coding sequences : CCDS (NCBI)LINC00845
Cluster EST : UnigeneHs.145227 [ NCBI ]
CGAP (NCI)Hs.145227
Alternative Splicing GalleryENSG00000227244
Gene ExpressionLINC00845 [ NCBI-GEO ]   LINC00845 [ EBI - ARRAY_EXPRESS ]   LINC00845 [ SEEK ]   LINC00845 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00845 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507058
GTEX Portal (Tissue expression)LINC00845
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00845
DMDM Disease mutations100507058
Blocks (Seattle)LINC00845
Human Protein AtlasENSG00000227244
Protein Interaction databases
FunCoupENSG00000227244
BioGRIDLINC00845
STRING (EMBL)LINC00845
ZODIACLINC00845
Ontologies - Pathways
Huge Navigator LINC00845 [HugePedia]
snp3D : Map Gene to Disease100507058
BioCentury BCIQLINC00845
ClinGenLINC00845
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507058
Clinical trialLINC00845
Miscellaneous
canSAR (ICR)LINC00845 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00845
EVEXLINC00845
GoPubMedLINC00845
iHOPLINC00845
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:12:25 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.