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LINC00847 (long intergenic non-protein coding RNA 847)

Identity

Other alias-
HGNC (Hugo) LINC00847
LocusID (NCBI) 729678
Atlas_Id 65617
Location 5q35.3  [Link to chromosome band 5q35]
Location_base_pair Starts at 180830957 and ends at 180835726 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00847   45050
Cards
Entrez_Gene (NCBI)LINC00847  729678  long intergenic non-protein coding RNA 847
Aliases
GeneCards (Weizmann)LINC00847
Ensembl hg19 (Hinxton)ENSG00000245060 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000245060 [Gene_View]  chr5:180830957-180835726 [Contig_View]  LINC00847 [Vega]
ICGC DataPortalENSG00000245060
TCGA cBioPortalLINC00847
AceView (NCBI)LINC00847
Genatlas (Paris)LINC00847
WikiGenes729678
SOURCE (Princeton)LINC00847
Genetics Home Reference (NIH)LINC00847
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00847  -     chr5:180830957-180835726 +  5q35.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00847  -     5q35.3   [Description]    (hg19-Feb_2009)
EnsemblLINC00847 - 5q35.3 [CytoView hg19]  LINC00847 - 5q35.3 [CytoView hg38]
Mapping of homologs : NCBILINC00847 [Mapview hg19]  LINC00847 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK095170 AK308536 BC047586 BX419382 DA361911
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00847
Cluster EST : UnigeneHs.655606 [ NCBI ]
CGAP (NCI)Hs.655606
Alternative Splicing GalleryENSG00000245060
Gene ExpressionLINC00847 [ NCBI-GEO ]   LINC00847 [ EBI - ARRAY_EXPRESS ]   LINC00847 [ SEEK ]   LINC00847 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00847 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)729678
GTEX Portal (Tissue expression)LINC00847
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00847
DMDM Disease mutations729678
Blocks (Seattle)LINC00847
Human Protein AtlasENSG00000245060
Protein Interaction databases
FunCoupENSG00000245060
BioGRIDLINC00847
STRING (EMBL)LINC00847
ZODIACLINC00847
Ontologies - Pathways
Huge Navigator LINC00847 [HugePedia]
snp3D : Map Gene to Disease729678
BioCentury BCIQLINC00847
ClinGenLINC00847
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD729678
Clinical trialLINC00847
Miscellaneous
canSAR (ICR)LINC00847 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00847
EVEXLINC00847
GoPubMedLINC00847
iHOPLINC00847
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 11:21:03 CEST 2017

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