Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LINC00852 (long intergenic non-protein coding RNA 852)

Identity

Alias_namesC3orf42
GHRLOS2
chromosome 3 open reading frame 42
ghrelin opposite strand/antisense RNA 2 (tail to tail)
Alias_symbol (synonym)NAG73
GHRL-AS2
Other alias
HGNC (Hugo) LINC00852
LocusID (NCBI) 84657
Atlas_Id 65621
Location 3p25.3  [Link to chromosome band 3p25]
Location_base_pair Starts at 10285146 and ends at 10285746 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00852   29904
Cards
Entrez_Gene (NCBI)LINC00852  84657  long intergenic non-protein coding RNA 852
AliasesC3orf42; GHRL-AS2; GHRLOS2; NAG73
GeneCards (Weizmann)LINC00852
Ensembl hg19 (Hinxton)ENSG00000231177 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000231177 [Gene_View]  chr3:10285146-10285746 [Contig_View]  LINC00852 [Vega]
ICGC DataPortalENSG00000231177
TCGA cBioPortalLINC00852
AceView (NCBI)LINC00852
Genatlas (Paris)LINC00852
WikiGenes84657
SOURCE (Princeton)LINC00852
Genetics Home Reference (NIH)LINC00852
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00852  -     chr3:10285146-10285746 +  3p25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00852  -     3p25.3   [Description]    (hg19-Feb_2009)
EnsemblLINC00852 - 3p25.3 [CytoView hg19]  LINC00852 - 3p25.3 [CytoView hg38]
Mapping of homologs : NCBILINC00852 [Mapview hg19]  LINC00852 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF085991 AF280797 BC015602 BC132802 BC132804
RefSeq transcript (Entrez)NM_001039102
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00852
Cluster EST : UnigeneHs.302131 [ NCBI ]
CGAP (NCI)Hs.302131
Alternative Splicing GalleryENSG00000231177
Gene ExpressionLINC00852 [ NCBI-GEO ]   LINC00852 [ EBI - ARRAY_EXPRESS ]   LINC00852 [ SEEK ]   LINC00852 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00852 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)84657
GTEX Portal (Tissue expression)LINC00852
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00852
DMDM Disease mutations84657
Blocks (Seattle)LINC00852
Human Protein AtlasENSG00000231177
IPIIPI00000257   
Protein Interaction databases
FunCoupENSG00000231177
BioGRIDLINC00852
STRING (EMBL)LINC00852
ZODIACLINC00852
Ontologies - Pathways
Huge Navigator LINC00852 [HugePedia]
snp3D : Map Gene to Disease84657
BioCentury BCIQLINC00852
ClinGenLINC00852
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84657
Chemical/Pharm GKB GenePA142672377
Clinical trialLINC00852
Miscellaneous
canSAR (ICR)LINC00852 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00852
EVEXLINC00852
GoPubMedLINC00852
iHOPLINC00852
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:57:24 CEST 2017

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