Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC00856 (long intergenic non-protein coding RNA 856)


Alias (NCBI)-
HGNC (Hugo) LINC00856
LocusID (NCBI) 100132987
Atlas_Id 65624
Location 10q22.3  [Link to chromosome band 10q22]
Location_base_pair Starts at 78248625 and ends at 78252645 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC00856   45111
Entrez_Gene (NCBI)LINC00856    long intergenic non-protein coding RNA 856
GeneCards (Weizmann)LINC00856
Ensembl hg19 (Hinxton)ENSG00000230417 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000230417 [Gene_View]  ENSG00000230417 [Sequence]  chr10:78248625-78252645 [Contig_View]  LINC00856 [Vega]
ICGC DataPortalENSG00000230417
TCGA cBioPortalLINC00856
AceView (NCBI)LINC00856
Genatlas (Paris)LINC00856
SOURCE (Princeton)LINC00856
Genetics Home Reference (NIH)LINC00856
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00856  -     chr10:78248625-78252645 +  10q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00856  -     10q22.3   [Description]    (hg19-Feb_2009)
GoldenPathLINC00856 - 10q22.3 [CytoView hg19]  LINC00856 - 10q22.3 [CytoView hg38]
Genome Data Viewer NCBILINC00856 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK091031 AK294518 BM666787
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00856
Gene ExpressionLINC00856 [ NCBI-GEO ]   LINC00856 [ EBI - ARRAY_EXPRESS ]   LINC00856 [ SEEK ]   LINC00856 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00856 [ Firebrowse - Broad ]
GenevisibleExpression of LINC00856 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100132987
GTEX Portal (Tissue expression)LINC00856
Human Protein AtlasENSG00000230417-LINC00856 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00856
Human Protein Atlas [tissue]ENSG00000230417-LINC00856 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:56:40 CEST 2021

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