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LINC00856 (long intergenic non-protein coding RNA 856)

Identity

Other alias-
HGNC (Hugo) LINC00856
LocusID (NCBI) 100132987
Atlas_Id 65624
Location 10q22.3  [Link to chromosome band 10q22]
Location_base_pair Starts at 80008382 and ends at 80012402 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00856   45111
Cards
Entrez_Gene (NCBI)LINC00856  100132987  long intergenic non-protein coding RNA 856
Aliases
GeneCards (Weizmann)LINC00856
Ensembl hg19 (Hinxton)ENSG00000230417 [Gene_View]  chr10:80008382-80012402 [Contig_View]  LINC00856 [Vega]
Ensembl hg38 (Hinxton)ENSG00000230417 [Gene_View]  chr10:80008382-80012402 [Contig_View]  LINC00856 [Vega]
ICGC DataPortalENSG00000230417
TCGA cBioPortalLINC00856
AceView (NCBI)LINC00856
Genatlas (Paris)LINC00856
WikiGenes100132987
SOURCE (Princeton)LINC00856
Genetics Home Reference (NIH)LINC00856
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00856  -     chr10:80008382-80012402 +  10q22.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00856  -     10q22.3   [Description]    (hg38-Dec_2013)
EnsemblLINC00856 - 10q22.3 [CytoView hg19]  LINC00856 - 10q22.3 [CytoView hg38]
Mapping of homologs : NCBILINC00856 [Mapview hg19]  LINC00856 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK091031 AK294518 BM666787 HG503045 HG503046
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000010 NC_018921 NT_030059 NW_004929376
Consensus coding sequences : CCDS (NCBI)LINC00856
Cluster EST : UnigeneHs.576887 [ NCBI ]
CGAP (NCI)Hs.576887
Alternative Splicing GalleryENSG00000230417
Gene ExpressionLINC00856 [ NCBI-GEO ]   LINC00856 [ EBI - ARRAY_EXPRESS ]   LINC00856 [ SEEK ]   LINC00856 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00856 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100132987
GTEX Portal (Tissue expression)LINC00856
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00856
DMDM Disease mutations100132987
Blocks (Seattle)LINC00856
Human Protein AtlasENSG00000230417
Protein Interaction databases
FunCoupENSG00000230417
BioGRIDLINC00856
STRING (EMBL)LINC00856
ZODIACLINC00856
Ontologies - Pathways
Huge Navigator LINC00856 [HugePedia]
snp3D : Map Gene to Disease100132987
BioCentury BCIQLINC00856
ClinGenLINC00856
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100132987
Clinical trialLINC00856
Miscellaneous
canSAR (ICR)LINC00856 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00856
EVEXLINC00856
GoPubMedLINC00856
iHOPLINC00856
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:12:27 CET 2017

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