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LINC00857 (long intergenic non-protein coding RNA 857)

Identity

Other alias-
HGNC (Hugo) LINC00857
LocusID (NCBI) 439990
Atlas_Id 65625
Location 10q22.3  [Link to chromosome band 10q22]
Location_base_pair Starts at 81967466 and ends at 81979413 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00857   45114
Cards
Entrez_Gene (NCBI)LINC00857  439990  long intergenic non-protein coding RNA 857
Aliases
GeneCards (Weizmann)LINC00857
Ensembl hg19 (Hinxton)ENSG00000237523 [Gene_View]  chr10:81967466-81979413 [Contig_View]  LINC00857 [Vega]
Ensembl hg38 (Hinxton)ENSG00000237523 [Gene_View]  chr10:81967466-81979413 [Contig_View]  LINC00857 [Vega]
ICGC DataPortalENSG00000237523
TCGA cBioPortalLINC00857
AceView (NCBI)LINC00857
Genatlas (Paris)LINC00857
WikiGenes439990
SOURCE (Princeton)LINC00857
Genetics Home Reference (NIH)LINC00857
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00857  -     chr10:81967466-81979413 +  10q22.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00857  -     10q22.3   [Description]    (hg38-Dec_2013)
EnsemblLINC00857 - 10q22.3 [CytoView hg19]  LINC00857 - 10q22.3 [CytoView hg38]
Mapping of homologs : NCBILINC00857 [Mapview hg19]  LINC00857 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC009626 BC048265 HG503084 HG503085
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000010 NC_018921 NT_030059 NW_004929376
Consensus coding sequences : CCDS (NCBI)LINC00857
Cluster EST : UnigeneHs.365566 [ NCBI ]
CGAP (NCI)Hs.365566
Alternative Splicing GalleryENSG00000237523
Gene ExpressionLINC00857 [ NCBI-GEO ]   LINC00857 [ EBI - ARRAY_EXPRESS ]   LINC00857 [ SEEK ]   LINC00857 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00857 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)439990
GTEX Portal (Tissue expression)LINC00857
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00857
DMDM Disease mutations439990
Blocks (Seattle)LINC00857
Human Protein AtlasENSG00000237523
Protein Interaction databases
FunCoupENSG00000237523
BioGRIDLINC00857
STRING (EMBL)LINC00857
ZODIACLINC00857
Ontologies - Pathways
Huge Navigator LINC00857 [HugePedia]
snp3D : Map Gene to Disease439990
BioCentury BCIQLINC00857
ClinGenLINC00857
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD439990
Clinical trialLINC00857
Miscellaneous
canSAR (ICR)LINC00857 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00857
EVEXLINC00857
GoPubMedLINC00857
iHOPLINC00857
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:12:27 CET 2017

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