Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC00865 (long intergenic non-protein coding RNA 865)


Alias (NCBI)-
HGNC (Hugo) LINC00865
LocusID (NCBI) 643529
Atlas_Id 65631
Location 10q23.31  [Link to chromosome band 10q23]
Location_base_pair Starts at 89829493 and ends at 89840861 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC00865   45170
Entrez_Gene (NCBI)LINC00865    long intergenic non-protein coding RNA 865
GeneCards (Weizmann)LINC00865
Ensembl hg19 (Hinxton)ENSG00000232229 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232229 [Gene_View]  ENSG00000232229 [Sequence]  chr10:89829493-89840861 [Contig_View]  LINC00865 [Vega]
ICGC DataPortalENSG00000232229
TCGA cBioPortalLINC00865
AceView (NCBI)LINC00865
Genatlas (Paris)LINC00865
SOURCE (Princeton)LINC00865
Genetics Home Reference (NIH)LINC00865
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00865  -     chr10:89829493-89840861 +  10q23.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00865  -     10q23.31   [Description]    (hg19-Feb_2009)
GoldenPathLINC00865 - 10q23.31 [CytoView hg19]  LINC00865 - 10q23.31 [CytoView hg38]
Genome Data Viewer NCBILINC00865 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AL137595 BC033541 BC035398 DB062095 OA985807
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00865
Gene ExpressionLINC00865 [ NCBI-GEO ]   LINC00865 [ EBI - ARRAY_EXPRESS ]   LINC00865 [ SEEK ]   LINC00865 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00865 [ Firebrowse - Broad ]
GenevisibleExpression of LINC00865 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)643529
GTEX Portal (Tissue expression)LINC00865
Human Protein AtlasENSG00000232229-LINC00865 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00865
Human Protein Atlas [tissue]ENSG00000232229-LINC00865 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:56:41 CEST 2021

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