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LINC00870 (long intergenic non-protein coding RNA 870)

Identity

Other alias-
HGNC (Hugo) LINC00870
LocusID (NCBI) 201617
Atlas_Id 65636
Location 3p13  [Link to chromosome band 3p13]
Location_base_pair Starts at 72200408 and ends at 72223490 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00870   27319
Cards
Entrez_Gene (NCBI)LINC00870  201617  long intergenic non-protein coding RNA 870
Aliases
GeneCards (Weizmann)LINC00870
Ensembl hg19 (Hinxton)ENSG00000243083 [Gene_View]  chr3:72200408-72223490 [Contig_View]  LINC00870 [Vega]
Ensembl hg38 (Hinxton)ENSG00000243083 [Gene_View]  chr3:72200408-72223490 [Contig_View]  LINC00870 [Vega]
ICGC DataPortalENSG00000243083
TCGA cBioPortalLINC00870
AceView (NCBI)LINC00870
Genatlas (Paris)LINC00870
WikiGenes201617
SOURCE (Princeton)LINC00870
Genetics Home Reference (NIH)LINC00870
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00870  -     chr3:72200408-72223490 +  3p13   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00870  -     3p13   [Description]    (hg38-Dec_2013)
EnsemblLINC00870 - 3p13 [CytoView hg19]  LINC00870 - 3p13 [CytoView hg38]
Mapping of homologs : NCBILINC00870 [Mapview hg19]  LINC00870 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK055831 BE468097 HG495793 HG495794 HG495795
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_022517 NW_004929310
Consensus coding sequences : CCDS (NCBI)LINC00870
Cluster EST : UnigeneHs.382623 [ NCBI ]
CGAP (NCI)Hs.382623
Alternative Splicing GalleryENSG00000243083
Gene ExpressionLINC00870 [ NCBI-GEO ]   LINC00870 [ EBI - ARRAY_EXPRESS ]   LINC00870 [ SEEK ]   LINC00870 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00870 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)201617
GTEX Portal (Tissue expression)LINC00870
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00870
DMDM Disease mutations201617
Blocks (Seattle)LINC00870
Human Protein AtlasENSG00000243083
Protein Interaction databases
FunCoupENSG00000243083
BioGRIDLINC00870
STRING (EMBL)LINC00870
ZODIACLINC00870
Ontologies - Pathways
Huge Navigator LINC00870 [HugePedia]
snp3D : Map Gene to Disease201617
BioCentury BCIQLINC00870
ClinGenLINC00870
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD201617
Clinical trialLINC00870
Miscellaneous
canSAR (ICR)LINC00870 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00870
EVEXLINC00870
GoPubMedLINC00870
iHOPLINC00870
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:12:29 CET 2017

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