Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC00877 (long intergenic non-protein coding RNA 877)

Identity

Other alias-
HGNC (Hugo) LINC00877
LocusID (NCBI) 285286
Atlas_Id 65638
Location 3p13  [Link to chromosome band 3p13]
Location_base_pair Starts at 72035519 and ends at 72100455 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00877   27706
Cards
Entrez_Gene (NCBI)LINC00877  285286  long intergenic non-protein coding RNA 877
Aliases
GeneCards (Weizmann)LINC00877
Ensembl hg19 (Hinxton)ENSG00000241163 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000241163 [Gene_View]  chr3:72035519-72100455 [Contig_View]  LINC00877 [Vega]
ICGC DataPortalENSG00000241163
TCGA cBioPortalLINC00877
AceView (NCBI)LINC00877
Genatlas (Paris)LINC00877
WikiGenes285286
SOURCE (Princeton)LINC00877
Genetics Home Reference (NIH)LINC00877
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00877  -     chr3:72035519-72100455 -  3p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00877  -     3p13   [Description]    (hg19-Feb_2009)
EnsemblLINC00877 - 3p13 [CytoView hg19]  LINC00877 - 3p13 [CytoView hg38]
Mapping of homologs : NCBILINC00877 [Mapview hg19]  LINC00877 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK097190 DA590669
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00877
Cluster EST : UnigeneHs.559386 [ NCBI ]
CGAP (NCI)Hs.559386
Alternative Splicing GalleryENSG00000241163
Gene ExpressionLINC00877 [ NCBI-GEO ]   LINC00877 [ EBI - ARRAY_EXPRESS ]   LINC00877 [ SEEK ]   LINC00877 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00877 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)285286
GTEX Portal (Tissue expression)LINC00877
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00877
DMDM Disease mutations285286
Blocks (Seattle)LINC00877
Human Protein AtlasENSG00000241163
Protein Interaction databases
FunCoupENSG00000241163
BioGRIDLINC00877
STRING (EMBL)LINC00877
ZODIACLINC00877
Ontologies - Pathways
Huge Navigator LINC00877 [HugePedia]
snp3D : Map Gene to Disease285286
BioCentury BCIQLINC00877
ClinGenLINC00877
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD285286
Clinical trialLINC00877
Miscellaneous
canSAR (ICR)LINC00877 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00877
EVEXLINC00877
GoPubMedLINC00877
iHOPLINC00877
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:13:40 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.