Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC00877 (long intergenic non-protein coding RNA 877)


Alias (NCBI)-
HGNC (Hugo) LINC00877
LocusID (NCBI) 285286
Atlas_Id 65638
Location 3p13  [Link to chromosome band 3p13]
Location_base_pair Starts at 72035519 and ends at 72100455 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC00877   27706
Entrez_Gene (NCBI)LINC00877    long intergenic non-protein coding RNA 877
GeneCards (Weizmann)LINC00877
Ensembl hg19 (Hinxton)ENSG00000241163 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000241163 [Gene_View]  ENSG00000241163 [Sequence]  chr3:72035519-72100455 [Contig_View]  LINC00877 [Vega]
ICGC DataPortalENSG00000241163
TCGA cBioPortalLINC00877
AceView (NCBI)LINC00877
Genatlas (Paris)LINC00877
SOURCE (Princeton)LINC00877
Genetics Home Reference (NIH)LINC00877
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00877  -     chr3:72035519-72100455 -  3p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00877  -     3p13   [Description]    (hg19-Feb_2009)
GoldenPathLINC00877 - 3p13 [CytoView hg19]  LINC00877 - 3p13 [CytoView hg38]
Genome Data Viewer NCBILINC00877 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK097190 DA590669 OA987952
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00877
Gene ExpressionLINC00877 [ NCBI-GEO ]   LINC00877 [ EBI - ARRAY_EXPRESS ]   LINC00877 [ SEEK ]   LINC00877 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00877 [ Firebrowse - Broad ]
GenevisibleExpression of LINC00877 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)285286
GTEX Portal (Tissue expression)LINC00877
Human Protein AtlasENSG00000241163-LINC00877 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00877
Human Protein Atlas [tissue]ENSG00000241163-LINC00877 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:56:42 CEST 2021

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