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LINC00879 (long intergenic non-protein coding RNA 879)

Identity

Other alias-
HGNC (Hugo) LINC00879
LocusID (NCBI) 255025
Atlas_Id 65639
Location 3q11.2  [Link to chromosome band 3q11]
Location_base_pair Starts at 94657107 and ends at 94710169 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00879   48566
Cards
Entrez_Gene (NCBI)LINC00879  255025  long intergenic non-protein coding RNA 879
Aliases
GeneCards (Weizmann)LINC00879
Ensembl hg19 (Hinxton)ENSG00000239589 [Gene_View]  chr3:94657107-94710169 [Contig_View]  LINC00879 [Vega]
Ensembl hg38 (Hinxton)ENSG00000239589 [Gene_View]  chr3:94657107-94710169 [Contig_View]  LINC00879 [Vega]
ICGC DataPortalENSG00000239589
TCGA cBioPortalLINC00879
AceView (NCBI)LINC00879
Genatlas (Paris)LINC00879
WikiGenes255025
SOURCE (Princeton)LINC00879
Genetics Home Reference (NIH)LINC00879
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00879  -     chr3:94657107-94710169 +  3q11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00879  -     3q11.2   [Description]    (hg38-Dec_2013)
EnsemblLINC00879 - 3q11.2 [CytoView hg19]  LINC00879 - 3q11.2 [CytoView hg38]
Mapping of homologs : NCBILINC00879 [Mapview hg19]  LINC00879 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC038721 BC048119 BC104171 BC104172 BC115359
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_005612 NW_004929311
Consensus coding sequences : CCDS (NCBI)LINC00879
Cluster EST : UnigeneHs.130994 [ NCBI ]
CGAP (NCI)Hs.130994
Alternative Splicing GalleryENSG00000239589
Gene ExpressionLINC00879 [ NCBI-GEO ]   LINC00879 [ EBI - ARRAY_EXPRESS ]   LINC00879 [ SEEK ]   LINC00879 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00879 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)255025
GTEX Portal (Tissue expression)LINC00879
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00879
DMDM Disease mutations255025
Blocks (Seattle)LINC00879
Human Protein AtlasENSG00000239589
Protein Interaction databases
FunCoupENSG00000239589
BioGRIDLINC00879
STRING (EMBL)LINC00879
ZODIACLINC00879
Ontologies - Pathways
Huge Navigator LINC00879 [HugePedia]
snp3D : Map Gene to Disease255025
BioCentury BCIQLINC00879
ClinGenLINC00879
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD255025
Clinical trialLINC00879
Miscellaneous
canSAR (ICR)LINC00879 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00879
EVEXLINC00879
GoPubMedLINC00879
iHOPLINC00879
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:12:30 CET 2017

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