Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC00881 (long intergenic non-protein coding RNA 881)

Identity

Other alias-
HGNC (Hugo) LINC00881
LocusID (NCBI) 100498859
Atlas_Id 65641
Location 3q25.31  [Link to chromosome band 3q25]
Location_base_pair Starts at 157089881 and ends at 157101135 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00881   48567
Cards
Entrez_Gene (NCBI)LINC00881  100498859  long intergenic non-protein coding RNA 881
Aliases
GeneCards (Weizmann)LINC00881
Ensembl hg19 (Hinxton)ENSG00000241135 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000241135 [Gene_View]  chr3:157089881-157101135 [Contig_View]  LINC00881 [Vega]
ICGC DataPortalENSG00000241135
TCGA cBioPortalLINC00881
AceView (NCBI)LINC00881
Genatlas (Paris)LINC00881
WikiGenes100498859
SOURCE (Princeton)LINC00881
Genetics Home Reference (NIH)LINC00881
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00881  -     chr3:157089881-157101135 +  3q25.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00881  -     3q25.31   [Description]    (hg19-Feb_2009)
EnsemblLINC00881 - 3q25.31 [CytoView hg19]  LINC00881 - 3q25.31 [CytoView hg38]
Mapping of homologs : NCBILINC00881 [Mapview hg19]  LINC00881 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI192928 DA560258
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00881
Cluster EST : UnigeneHs.633655 [ NCBI ]
CGAP (NCI)Hs.633655
Alternative Splicing GalleryENSG00000241135
Gene ExpressionLINC00881 [ NCBI-GEO ]   LINC00881 [ EBI - ARRAY_EXPRESS ]   LINC00881 [ SEEK ]   LINC00881 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00881 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100498859
GTEX Portal (Tissue expression)LINC00881
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00881
DMDM Disease mutations100498859
Blocks (Seattle)LINC00881
Human Protein AtlasENSG00000241135
Protein Interaction databases
FunCoupENSG00000241135
BioGRIDLINC00881
STRING (EMBL)LINC00881
ZODIACLINC00881
Ontologies - Pathways
Huge Navigator LINC00881 [HugePedia]
snp3D : Map Gene to Disease100498859
BioCentury BCIQLINC00881
ClinGenLINC00881
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100498859
Clinical trialLINC00881
Miscellaneous
canSAR (ICR)LINC00881 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00881
EVEXLINC00881
GoPubMedLINC00881
iHOPLINC00881
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:13:40 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.