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LINC00882 (long intergenic non-protein coding RNA 882)

Identity

Other alias-
HGNC (Hugo) LINC00882
LocusID (NCBI) 100302640
Atlas_Id 65642
Location 3q13.12  [Link to chromosome band 3q13]
Location_base_pair Starts at 106828637 and ends at 106959485 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00882   48568
Cards
Entrez_Gene (NCBI)LINC00882  100302640  long intergenic non-protein coding RNA 882
Aliases
GeneCards (Weizmann)LINC00882
Ensembl hg19 (Hinxton)ENSG00000242759 [Gene_View]  chr3:106828637-106959485 [Contig_View]  LINC00882 [Vega]
Ensembl hg38 (Hinxton)ENSG00000242759 [Gene_View]  chr3:106828637-106959485 [Contig_View]  LINC00882 [Vega]
ICGC DataPortalENSG00000242759
TCGA cBioPortalLINC00882
AceView (NCBI)LINC00882
Genatlas (Paris)LINC00882
WikiGenes100302640
SOURCE (Princeton)LINC00882
Genetics Home Reference (NIH)LINC00882
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00882  -     chr3:106828637-106959485 -  3q13.12   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00882  -     3q13.12   [Description]    (hg38-Dec_2013)
EnsemblLINC00882 - 3q13.12 [CytoView hg19]  LINC00882 - 3q13.12 [CytoView hg38]
Mapping of homologs : NCBILINC00882 [Mapview hg19]  LINC00882 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BG196202 BX117271 DB443285 HG495861 HG495862
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_005612 NW_004929311
Consensus coding sequences : CCDS (NCBI)LINC00882
Cluster EST : UnigeneHs.648607 [ NCBI ]
CGAP (NCI)Hs.648607
Alternative Splicing GalleryENSG00000242759
Gene ExpressionLINC00882 [ NCBI-GEO ]   LINC00882 [ EBI - ARRAY_EXPRESS ]   LINC00882 [ SEEK ]   LINC00882 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00882 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100302640
GTEX Portal (Tissue expression)LINC00882
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00882
DMDM Disease mutations100302640
Blocks (Seattle)LINC00882
Human Protein AtlasENSG00000242759
Protein Interaction databases
FunCoupENSG00000242759
BioGRIDLINC00882
STRING (EMBL)LINC00882
ZODIACLINC00882
Ontologies - Pathways
Huge Navigator LINC00882 [HugePedia]
snp3D : Map Gene to Disease100302640
BioCentury BCIQLINC00882
ClinGenLINC00882
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100302640
Clinical trialLINC00882
Miscellaneous
canSAR (ICR)LINC00882 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00882
EVEXLINC00882
GoPubMedLINC00882
iHOPLINC00882
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:12:31 CET 2017

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