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LINC00883 (long intergenic non-protein coding RNA 883)

Identity

Other alias-
HGNC (Hugo) LINC00883
LocusID (NCBI) 344595
Atlas_Id 65643
Location 3q13.12  [Link to chromosome band 3q13]
Location_base_pair Starts at 106959539 and ends at 106967719 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00883   48569
Cards
Entrez_Gene (NCBI)LINC00883  344595  long intergenic non-protein coding RNA 883
Aliases
GeneCards (Weizmann)LINC00883
Ensembl hg19 (Hinxton)ENSG00000243701 [Gene_View]  chr3:106959539-106967719 [Contig_View]  LINC00883 [Vega]
Ensembl hg38 (Hinxton)ENSG00000243701 [Gene_View]  chr3:106959539-106967719 [Contig_View]  LINC00883 [Vega]
ICGC DataPortalENSG00000243701
TCGA cBioPortalLINC00883
AceView (NCBI)LINC00883
Genatlas (Paris)LINC00883
WikiGenes344595
SOURCE (Princeton)LINC00883
Genetics Home Reference (NIH)LINC00883
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00883  -     chr3:106959539-106967719 +  3q13.12   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00883  -     3q13.12   [Description]    (hg38-Dec_2013)
EnsemblLINC00883 - 3q13.12 [CytoView hg19]  LINC00883 - 3q13.12 [CytoView hg38]
Mapping of homologs : NCBILINC00883 [Mapview hg19]  LINC00883 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK055934 AK309100 BC039550 BU618315 DA339707
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_005612 NW_004929311
Consensus coding sequences : CCDS (NCBI)LINC00883
Cluster EST : UnigeneHs.543039 [ NCBI ]
CGAP (NCI)Hs.543039
Alternative Splicing GalleryENSG00000243701
Gene ExpressionLINC00883 [ NCBI-GEO ]   LINC00883 [ EBI - ARRAY_EXPRESS ]   LINC00883 [ SEEK ]   LINC00883 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00883 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)344595
GTEX Portal (Tissue expression)LINC00883
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00883
DMDM Disease mutations344595
Blocks (Seattle)LINC00883
Human Protein AtlasENSG00000243701
Protein Interaction databases
FunCoupENSG00000243701
BioGRIDLINC00883
STRING (EMBL)LINC00883
ZODIACLINC00883
Ontologies - Pathways
Huge Navigator LINC00883 [HugePedia]
snp3D : Map Gene to Disease344595
BioCentury BCIQLINC00883
ClinGenLINC00883
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD344595
Clinical trialLINC00883
Miscellaneous
canSAR (ICR)LINC00883 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00883
EVEXLINC00883
GoPubMedLINC00883
iHOPLINC00883
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:12:31 CET 2017

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