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LINC00886 (long intergenic non-protein coding RNA 886)

Identity

Other alias-
HGNC (Hugo) LINC00886
LocusID (NCBI) 730091
Atlas_Id 65646
Location 3q25.31  [Link to chromosome band 3q25]
Location_base_pair Starts at 156747343 and ends at 156817062 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00886   48572
Cards
Entrez_Gene (NCBI)LINC00886  730091  long intergenic non-protein coding RNA 886
Aliases
GeneCards (Weizmann)LINC00886
Ensembl hg19 (Hinxton)ENSG00000240875 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000240875 [Gene_View]  chr3:156747343-156817062 [Contig_View]  LINC00886 [Vega]
ICGC DataPortalENSG00000240875
TCGA cBioPortalLINC00886
AceView (NCBI)LINC00886
Genatlas (Paris)LINC00886
WikiGenes730091
SOURCE (Princeton)LINC00886
Genetics Home Reference (NIH)LINC00886
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00886  -     chr3:156747343-156817062 -  3q25.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00886  -     3q25.31   [Description]    (hg19-Feb_2009)
EnsemblLINC00886 - 3q25.31 [CytoView hg19]  LINC00886 - 3q25.31 [CytoView hg38]
Mapping of homologs : NCBILINC00886 [Mapview hg19]  LINC00886 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056401 BX115942 CA311498 DA163224
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00886
Cluster EST : UnigeneHs.659905 [ NCBI ]
CGAP (NCI)Hs.659905
Alternative Splicing GalleryENSG00000240875
Gene ExpressionLINC00886 [ NCBI-GEO ]   LINC00886 [ EBI - ARRAY_EXPRESS ]   LINC00886 [ SEEK ]   LINC00886 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00886 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)730091
GTEX Portal (Tissue expression)LINC00886
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00886
DMDM Disease mutations730091
Blocks (Seattle)LINC00886
Human Protein AtlasENSG00000240875
Protein Interaction databases
FunCoupENSG00000240875
BioGRIDLINC00886
STRING (EMBL)LINC00886
ZODIACLINC00886
Ontologies - Pathways
Huge Navigator LINC00886 [HugePedia]
snp3D : Map Gene to Disease730091
BioCentury BCIQLINC00886
ClinGenLINC00886
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD730091
Clinical trialLINC00886
Miscellaneous
canSAR (ICR)LINC00886 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00886
EVEXLINC00886
GoPubMedLINC00886
iHOPLINC00886
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:57:30 CEST 2017

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