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LINC00889 (long intergenic non-protein coding RNA 889)

Identity

Alias_symbol (synonym)FLJ30672
Other alias-
HGNC (Hugo) LINC00889
LocusID (NCBI) 158696
Atlas_Id 65649
Location Xq26.3  [Link to chromosome band Xq26]
Location_base_pair Starts at 137696892 and ends at 137699799 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00889   26410
Cards
Entrez_Gene (NCBI)LINC00889  158696  long intergenic non-protein coding RNA 889
Aliases
GeneCards (Weizmann)LINC00889
Ensembl hg19 (Hinxton) [Gene_View]  chrX:137696892-137699799 [Contig_View]  LINC00889 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chrX:137696892-137699799 [Contig_View]  LINC00889 [Vega]
TCGA cBioPortalLINC00889
AceView (NCBI)LINC00889
Genatlas (Paris)LINC00889
WikiGenes158696
SOURCE (Princeton)LINC00889
Genetics Home Reference (NIH)LINC00889
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00889  -     chrX:137696892-137699799 -  Xq26.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00889  -     Xq26.3   [Description]    (hg38-Dec_2013)
EnsemblLINC00889 - Xq26.3 [CytoView hg19]  LINC00889 - Xq26.3 [CytoView hg38]
Mapping of homologs : NCBILINC00889 [Mapview hg19]  LINC00889 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK055234 AK055382 BC105719 BC105725 BC105726
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000023 NC_018934 NT_011786 NW_004929446
Consensus coding sequences : CCDS (NCBI)LINC00889
Cluster EST : UnigeneHs.558664 [ NCBI ]
CGAP (NCI)Hs.558664
Gene ExpressionLINC00889 [ NCBI-GEO ]   LINC00889 [ EBI - ARRAY_EXPRESS ]   LINC00889 [ SEEK ]   LINC00889 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00889 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)158696
GTEX Portal (Tissue expression)LINC00889
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00889
DMDM Disease mutations158696
Blocks (Seattle)LINC00889
HPRD06549
IPIIPI00056350   
Protein Interaction databases
BioGRIDLINC00889
STRING (EMBL)LINC00889
ZODIACLINC00889
Ontologies - Pathways
Huge Navigator LINC00889 [HugePedia]
snp3D : Map Gene to Disease158696
BioCentury BCIQLINC00889
ClinGenLINC00889
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD158696
Clinical trialLINC00889
Miscellaneous
canSAR (ICR)LINC00889 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00889
EVEXLINC00889
GoPubMedLINC00889
iHOPLINC00889
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:12:32 CET 2017

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