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LINC00890 (long intergenic non-protein coding RNA 890)

Identity

Other aliasDKFZp686D0853
HGNC (Hugo) LINC00890
LocusID (NCBI) 401613
Atlas_Id 65650
Location Xq23  [Link to chromosome band Xq23]
Location_base_pair Starts at 111511662 and ends at 111522399 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00890   48576
Cards
Entrez_Gene (NCBI)LINC00890  401613  long intergenic non-protein coding RNA 890
AliasesDKFZp686D0853
GeneCards (Weizmann)LINC00890
Ensembl hg19 (Hinxton)ENSG00000260802 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000260802 [Gene_View]  chrX:111511662-111522399 [Contig_View]  LINC00890 [Vega]
ICGC DataPortalENSG00000260802
TCGA cBioPortalLINC00890
AceView (NCBI)LINC00890
Genatlas (Paris)LINC00890
WikiGenes401613
SOURCE (Princeton)LINC00890
Genetics Home Reference (NIH)LINC00890
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00890  -     chrX:111511662-111522399 +  Xq23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00890  -     Xq23   [Description]    (hg19-Feb_2009)
EnsemblLINC00890 - Xq23 [CytoView hg19]  LINC00890 - Xq23 [CytoView hg38]
Mapping of homologs : NCBILINC00890 [Mapview hg19]  LINC00890 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA429445 BX537697 BY994992 DR005240
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00890
Cluster EST : UnigeneHs.98581 [ NCBI ]
CGAP (NCI)Hs.98581
Alternative Splicing GalleryENSG00000260802
Gene ExpressionLINC00890 [ NCBI-GEO ]   LINC00890 [ EBI - ARRAY_EXPRESS ]   LINC00890 [ SEEK ]   LINC00890 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00890 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)401613
GTEX Portal (Tissue expression)LINC00890
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00890
DMDM Disease mutations401613
Blocks (Seattle)LINC00890
Human Protein AtlasENSG00000260802
IPIIPI00783957   
Protein Interaction databases
FunCoupENSG00000260802
BioGRIDLINC00890
STRING (EMBL)LINC00890
ZODIACLINC00890
Ontologies - Pathways
Huge Navigator LINC00890 [HugePedia]
snp3D : Map Gene to Disease401613
BioCentury BCIQLINC00890
ClinGenLINC00890
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD401613
Clinical trialLINC00890
Miscellaneous
canSAR (ICR)LINC00890 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00890
EVEXLINC00890
GoPubMedLINC00890
iHOPLINC00890
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:13:41 CEST 2017

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