Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LINC00892 (long intergenic non-protein coding RNA 892)

Identity

Other alias-
HGNC (Hugo) LINC00892
LocusID (NCBI) 100128420
Atlas_Id 65652
Location Xq26.3  [Link to chromosome band Xq26]
Location_base_pair Starts at 136639543 and ends at 136642429 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00892   48578
Cards
Entrez_Gene (NCBI)LINC00892  100128420  long intergenic non-protein coding RNA 892
Aliases
GeneCards (Weizmann)LINC00892
Ensembl hg19 (Hinxton)ENSG00000233093 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000233093 [Gene_View]  chrX:136639543-136642429 [Contig_View]  LINC00892 [Vega]
ICGC DataPortalENSG00000233093
TCGA cBioPortalLINC00892
AceView (NCBI)LINC00892
Genatlas (Paris)LINC00892
WikiGenes100128420
SOURCE (Princeton)LINC00892
Genetics Home Reference (NIH)LINC00892
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00892  -     chrX:136639543-136642429 +  Xq26.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00892  -     Xq26.3   [Description]    (hg19-Feb_2009)
EnsemblLINC00892 - Xq26.3 [CytoView hg19]  LINC00892 - Xq26.3 [CytoView hg38]
Mapping of homologs : NCBILINC00892 [Mapview hg19]  LINC00892 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC042469 BG189095 BX112139 CD639382 CD699893
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00892
Cluster EST : UnigeneHs.152595 [ NCBI ]
CGAP (NCI)Hs.152595
Alternative Splicing GalleryENSG00000233093
Gene ExpressionLINC00892 [ NCBI-GEO ]   LINC00892 [ EBI - ARRAY_EXPRESS ]   LINC00892 [ SEEK ]   LINC00892 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00892 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100128420
GTEX Portal (Tissue expression)LINC00892
Human Protein AtlasENSG00000233093-LINC00892 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00892
DMDM Disease mutations100128420
Blocks (Seattle)LINC00892
Human Protein Atlas [tissue]ENSG00000233093-LINC00892 [tissue]
Protein Interaction databases
FunCoupENSG00000233093
BioGRIDLINC00892
STRING (EMBL)LINC00892
ZODIACLINC00892
Ontologies - Pathways
Huge Navigator LINC00892 [HugePedia]
snp3D : Map Gene to Disease100128420
BioCentury BCIQLINC00892
ClinGenLINC00892
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100128420
Clinical trialLINC00892
Miscellaneous
canSAR (ICR)LINC00892 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00892
EVEXLINC00892
GoPubMedLINC00892
iHOPLINC00892
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:59:53 CET 2017

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